KEGG   Zingiber officinale (ginger): 121971673
Entry
121971673         CDS       T08725                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof03015  mRNA surveillance pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121971673
  09122 Translation
   03013 Nucleocytoplasmic transport
    121971673
   03015 mRNA surveillance pathway
    121971673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    121971673
   03041 Spliceosome [BR:zof03041]
    121971673
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121971673
Spliceosome [BR:zof03041]
 Complex C
  Other components
   EJC/TREX
    121971673
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 121971673
NCBI-ProteinID: XP_042378988
LinkDB
Position
4A:complement(150561199..150567979)
AA seq 202 aa
MAAAVGDVEVVDFEPDEDDLMDEEVGAADADPSPAPAAKLRSTIAGGGSSGLVPRKTKGR
GFREEAGPGRGSHLSAREFDSLDSDGGPGPQRSIEGWMLLVSGVHEEAQEDDLHNAFREF
GQVKNLHLNLDRRTGFVKGYALIEYENFEEAQTAIATLNGTELLTQRIFVDWAFSKGPVK
RRNARRRSPGAHRSRSPPRRRY
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcggctgccgtaggcgacgttgaggtggtggatttcgagcccgatgaggacgatctc
atggacgaggaggttggcgccgctgacgccgacccttctcctgctcctgcggctaagctt
cgatccaccatcgcgggcggtggctcctctggattagtacccaggaagaccaaaggccgg
ggcttccgcgaggaggcaggccctggtcgcggcagccacctgtctgccagggagttcgat
tccctcgactcggatggaggtcccgggcctcagcgatctattgagggatggatgttgtta
gtatctggagttcatgaagaagcacaggaagatgatcttcataatgcctttcgtgaattt
ggccaagttaaaaatttgcatttaaatcttgaccgccgcactggtttcgtgaagggttac
gctctaattgaatacgagaactttgaggaagcacaaactgcaattgcaacacttaatgga
actgagctccttactcaaagaatttttgttgattgggccttcagcaaaggtccagtcaag
cgtagaaacgcgaggagaagatcgcctggagctcaccgttctaggagtccccctaggcgt
agatactaa

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