KEGG   Zingiber officinale (ginger): 121971743
Entry
121971743         CDS       T08725                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03022  Basal transcription factors
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121971743
  09124 Replication and repair
   03420 Nucleotide excision repair
    121971743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    121971743
   03400 DNA repair and recombination proteins [BR:zof03400]
    121971743
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121971743
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121971743
SSDB
Motif
Pfam: Cyclin_N Cyclin_C_2 TFIIB RB_B YhfG FAM193_C
Other DBs
NCBI-GeneID: 121971743
NCBI-ProteinID: XP_042379090
LinkDB
Position
4A:complement(153470746..153475968)
AA seq 330 aa
MVDFQSSTHRSRWIFSLEELFEKHKNANQRASKLLEQFGITRLEVHVDGSVSYPEPIFDQ
KDNAERSIPEPLNCEEEQHMRIFYEQKIQEVCRAFKFPHKIQATAIIYFKRFCLQWSVME
HHPKRIMLTCIYASCKVEENHVSAEELGKGIQFDHQIILNNEMAVYQSLGFDLIVYSPYR
SIEGFLEGMQDFLHARDDQKKFQDLLQTSYSEVDRMMLTDGPLLFAPAQLALAALRRANE
VHRFLDFERYLNFIVSRQRSTHSASQLLETLNSIDILVAQLNILTADEMKDIDRKLKSCW
DPITEDNKKRKKRSKHKSKRTASEMQGLLA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggtggactttcagagctctacccatcgttcaaggtggattttttcacttgaagagctg
tttgaaaagcataagaatgcaaaccaaagggcctcaaagctgcttgaacagtttggcatc
acacggctggaagttcatgttgatgggtctgtctcctaccctgaacctatatttgaccaa
aaagataatgccgagaggtccattcccgagcctcttaattgtgaagaggagcagcatatg
cggatcttctatgagcaaaaaattcaagaagtgtgtcgagcatttaagtttccccataag
attcaggcaacagcaattatctacttcaaaagattttgtttgcagtggtctgtcatggag
catcacccgaaacgtataatgttaacttgcatatacgcttcatgtaaagtggaagaaaat
catgtatctgctgaggagcttgggaagggaattcagtttgatcatcagattatcctcaat
aatgaaatggctgtttatcagagtcttggctttgatttaattgtttactcgccctaccgg
tcaattgaaggtttccttgagggcatgcaggattttttacatgcaagagatgaccaaaag
aagtttcaggacttgctacaaacttcatattcagaggtagataggatgatgttgaccgat
ggaccacttctctttgctcccgcgcagttagcactggctgccttgcgcagagcaaatgag
gtgcatagattccttgattttgaaagatacttgaatttcatagtgtctcgccagcggtct
acccactcggcttctcagcttcttgaaactttgaattcaatcgatatattggttgctcaa
cttaacatactgacagcagacgaaatgaaggatatcgatcgaaaactgaagagctgttgg
gatccaatcacagaagacaataagaagcgaaaaaaaagatcaaaacacaagtcgaaaaga
actgcaagtgagatgcaagggctactggcatga

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