Zingiber officinale (ginger): 121971746
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Entry
121971746 CDS
T08725
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121971746
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121971746
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF4140
Motif
Other DBs
NCBI-GeneID:
121971746
NCBI-ProteinID:
XP_042379095
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Position
4A:153664905..153671474
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AA seq
776 aa
AA seq
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MMLPPPSPHPSSASFSFLPIPSPSLRSFSLHPHRLRPPRLLASDHLDVPSPASEKENRPP
SSVPPWILADGADSLKMPTAPWMSSPLVLPRDQVLDPSSPRRSARRKHKNDGRANRDLTE
KVRGGRSRYAMLGIIRNIKSLRELHSLEADEEKPTSSGVSGGAQVVDLDIPLGTGDSGGG
RRIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEAKKMKKWVKAKKAGVTQV
VVEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGM
ILHTPSCYNAVDQVNLGIFDSNRAIFSVNSDGIMEDMENNIYLTNKNSETQHPVEGSLYE
REANRLLDGLGPRFIDWWWRTPMPVDADLLPEVVPGFRPPFRMRPPGIRVKLTDDELTYL
RKLARSLPTHFALGRNTKLQGLASSIIKLWKKSCIAKIAIKIGIQNTNNEQMSLELKRLT
GGVLILRNKFFIILYRGKDFLPDGVFNLIEEREAELDKELLVEEEARVSSTNLTHTMDTV
SLSSNSAGTCLEFQNIQTNHVRLSIKNHRCQVQIEAEKEKLEKELRLNERRLFILNQKIE
KSNQLLSKLSLSWCPSDQIADQEILTEEERQAFRKIGLAMDEVILLGRRGIYNGVIGSIH
QHWKHREVVKVITKQKAKYHVNYSARLLEVECGGILVAVEKLRTSHAIIIYRGKNYARPL
QLPDNILTKREALQRSIEIQRRGSLKHFSLQREKAIRKLKQRLRDLERKSSEMTTC
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgccgcctccgtctcctcatccttcctccgcttcgttctccttcctcccgatc
ccttcgccctctctccgatccttctcccttcaccctcaccgtctccggcctcctcgcctg
ctcgcctccgatcatctcgacgtcccttcgccggccagcgagaaagagaaccggccaccc
tcctctgtgcctccatggatccttgccgacggagctgactcgctcaagatgcccaccgct
ccgtggatgtcctccccacttgtcctcccccgggaccaagttctggacccctcgagccct
cgtagaagcgccaggaggaagcacaagaacgatggccgcgccaatcgggacctcactgaa
aaagtcagaggaggtcggagtcgctatgctatgctcggaattattagaaacatcaagagc
ctccgtgagctccattcgctggaggcggatgaggagaaaccgacctcttccggtgtttct
ggtggggcccaggtagtggatctcgacatcccacttgggacaggagattctggaggcggt
cggaggattccgtgggtttccgcggaggtggataagctagtgtttaggagagagaagaag
gtgaaggagataacggcggcggaattggtgcttgctcctgatttactctttcgactgcga
ggcgaagcaaagaagatgaagaagtgggtgaaggccaagaaagctggcgtgacgcaagtg
gtggtggaggagattcagcggggttggaggaatgatgagcttgtcatggttaggattgtg
gaacccctccggcgaaacatggacagagctagggaaattgttgagacaaagactggaggt
ttggttgtatggataaagagagatttcctagttatctataggggagaaaaatatggaatg
attcttcatacccctagttgctataatgctgttgatcaagtgaatcttggcatatttgac
agtaatcgtgctattttttcagtaaattctgatggaataatggaggatatggaaaataat
atttatctaaccaacaagaattctgaaactcaacatccagttgaaggatctctttatgag
agagaagcaaatagattattggatggattaggtccccggtttattgattggtggtggcga
acgccgatgcctgtggatgctgacctactcccagaagttgttcctggttttaggcctcca
ttcaggatgcgcccccctggtataagagtaaagttaacagatgatgagttgacctatctg
cggaaacttgcccgttctttacccacacattttgctcttggtagaaacacaaaacttcag
ggcttggcttcttcaataataaagctttggaagaaaagctgcatagctaagattgcaatc
aaaataggaattcaaaataccaacaatgagcaaatgtcattggagctcaagcggctcact
ggtggagttcttatattgagaaacaagttctttatcattttatacagaggcaaagatttt
ctccctgatggagtctttaatcttattgaggagagagaagcagagcttgataaggaactt
cttgtggaagaagaagctcgagtcagttccacaaacttgacccatacaatggacaccgta
tcactcagttctaacagtgctggtacatgcctggaatttcaaaacattcaaacaaatcat
gtcagacttagcattaagaatcatagatgtcaagttcaaattgaagccgaaaaggaaaaa
ttggagaaggaactaaggctcaatgagcgtaggcttttcattcttaatcagaagattgag
aaatccaatcaattgttgagcaagcttagtttgtcatggtgcccttccgaccaaattgca
gaccaggaaatattgacggaagaggagaggcaggcttttcgtaaaattggcttggccatg
gatgaagttatattgctaggtaggcgtggaatctataacggggtaattggaagtattcat
cagcattggaaacatagagaagttgtgaaagtaattaccaagcaaaaggcaaagtaccac
gttaattattctgcaagattgcttgaagtggagtgtggtgggatactggtggctgtggag
aaactcagaacaagccatgcaataattatctaccgtggaaagaactacgctcgtccattg
cagctgcccgacaatattctgactaaaagagaagcattacaaagatcaattgagatccag
cgtcgtggatccttgaaacatttctcactgcaaagagagaaagcaatcaggaaattaaaa
cagagactgagagatttagagcggaagagcagtgaaatgactacttgttga
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