Zingiber officinale (ginger): 121971767
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Entry
121971767 CDS
T08725
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121971767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121971767
03051 Proteasome [BR:
zof03051
]
121971767
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121971767
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121971767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR_2
DUF5816
K-cyclin_vir_C
Motif
Other DBs
NCBI-GeneID:
121971767
NCBI-ProteinID:
XP_042379131
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Position
4A:154229519..154238356
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AA seq
624 aa
AA seq
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MDADALSSSSPAVASVPPVQTACWSSVLQKKPTVHPQEAISTRVFGSLTSSKGISVAVLD
ANALIHGDKLANSADKFVSVPEVLDEVRDHVSRQRLSFLPFPVETMEPSPEFIKKVVNFA
RETGDLQTLSDVDLKVVALAYMLESQIHGIDHLRERPPPLHVVNVKNLPAAQLPGWGSNV
PNLAEWEALEEATEGGRDHNSKILGPRDMNNQVEPNSSSASIPDEHVEGSKTFDKPKRSF
APKKEIVLEGKKMVASGIDASQGEDTEIAGDWHPAVSRSTHRRFLRRKARRELSKETEEN
GHSSSHEEVEGTKSEGNVELSDGGEVEYPVFNELETNGGHFQNEQQIEWNQKEAALDFDS
SQPSREGVEDDRLRTYIGSTPLEIEEDNSEYAVDSVYDNDAGIDDFSEELANLELDSLAD
ESTETTYIDDQSSEQSWMLKSLSESSVACVTSDYAMQNVLLQIGLRLLAPGGMQIRQLHR
WVLKCHACNKVTQEIGRIFCPKCGNGGTLRKVSVTVGENGIIMAARRPRIVLRGTKFSLP
LPQGGREAITKNLILREDQLPHKLLYPKSKKKTNKEGKEFLGADDIFSHSDEKRAPLKPP
VRKALAMFGGKRNPNDNHFSRRKH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatgcgctctcatcttcctctccggcggttgcctcggttcctccggtgcag
accgcgtgctggagctctgtgttgcagaagaagccgacggtgcatccccaagaggcgatc
tccacgcgagtgttcggaagcctcacgtcgagcaaaggcatctcggtggcggtgctcgat
gccaacgctctgatccatggcgacaagcttgccaattctgctgacaagttcgtgtctgtg
cccgaggtcctggacgaggtacgcgatcatgtctcgcgtcagcgcctctccttcctgccc
ttccccgtcgagaccatggaaccctctcctgaatttatcaagaaagttgtcaattttgca
cgagaaactggggatctgcagactctttcagatgtagaccttaaggtcgttgctctagct
tatatgttagaatcccagatccatggaattgatcatctaagggagagaccgcctcctctt
catgtggtgaatgtgaagaacctaccggcggctcaactgccggggtggggttccaatgtt
cctaatttagcagaatgggaagccctggaagaagcaactgaaggaggtcgggatcataat
tctaaaatacttggaccgagagatatgaacaatcaagttgaacctaacagttcttctgct
tccatacctgatgagcatgttgaagggagtaagacgtttgataagcctaaaaggtctttt
gcacccaagaaggagattgtgttggaggggaaaaagatggttgcttctggcatcgatgcc
tctcaaggtgaagacactgaaattgcaggtgattggcaccctgcagttagccggagcact
catagaagatttttaagaaggaaagcaaggcgtgagttgtccaaagaaacagaggaaaat
ggccactcgtcaagccacgaagaagtggaagggacaaagtctgaaggcaatgttgaatta
tctgatggaggtgaggtagagtatcctgtatttaatgaacttgaaaccaatggtggacat
tttcaaaatgaacaacaaattgagtggaatcagaaagaggcggcattggattttgattct
tcacaaccttcacgtgaaggtgtagaagatgacagacttaggacttacataggatctact
cctttagaaattgaggaagataactcagagtatgcggttgattctgtttatgacaatgat
gctgggattgatgacttcagtgaagagttagctaacttagaattggatagtctggctgat
gaaagtactgagacaacttatatagatgaccagagcagtgaacagagttggatgctcaag
tccttatcagagtcaagtgtagcttgtgttactagtgactacgcaatgcaaaatgttctt
ctgcaaattggtcttcgactattagcaccaggagggatgcagattcgccaattacatagg
tgggttctaaaatgtcatgcttgcaataaagtgacacaagaaattgggagaatattttgt
ccaaaatgtggcaatggtggaactttaaggaaggtatccgtgacagttggtgaaaatgga
atcatcatggctgcacgccggcctcgaatagtccttcgtggaacaaaattctcgcttcca
ttgcctcaaggtggacgagaagctatcacaaagaacctcatcttacgagaagaccaactc
cctcacaagttactctatccaaaatcaaagaagaagacaaacaaagagggcaaggaattt
ctgggtgcagatgatatcttttcccactccgacgagaagagagccccgcttaagcctcct
gtgaggaaagcacttgctatgttcggtggaaaaagaaatcctaacgataaccatttttct
cgccggaagcactaa
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