Zingiber officinale (ginger): 121971835
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Entry
121971835 CDS
T08725
Name
(RefSeq) ABC transporter G family member 42-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121971835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121971835
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
121971835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
ABC2_membrane_3
AAA_28
AAA_25
AAA_33
RsgA_GTPase
nSTAND3
CCDC-167
ABC_ATPase
DUF1440
Motif
Other DBs
NCBI-GeneID:
121971835
NCBI-ProteinID:
XP_042379229
LinkDB
All DBs
Position
4A:complement(156674262..156684158)
Genome browser
AA seq
1502 aa
AA seq
DB search
MEAVERVWDSGRRASQSLSHNISRGMNMGGWGVEDVFSRNSSTRRRSGSSRDDDEEALRW
AALERLPTYDRLRTAILRSAADPGGGPGEARRQYRHKEVDVRKLGPAERQEFIDRVFKVA
EEGNERFLKKLRDRIDKVGIRLPTIEVRFEHLNVEAKCHAGDRALPTLTNTVRDIAESAL
ALLGIRLTKRTTLTILKDVSGIIQPSRMTLLLGPPSSGKTTLLLALAGKLDPTLKVSGEI
TYNGHRLDEFVPQKTAAYISQNDVHLGEMTVKETLDFSARCQGVGVRYDLLSELAKREKE
AGIFPEAEVDLFMKATAIEGVESSLQTDYTLRILGLDICADTIVGDEMQRGISGGQKKRV
TTGEMMVGPTKVLFMDEISTGLDSSTTYQIVKCLQQIVHLGEATILMSLLQPAPETFDLF
DDILLLSEGQIVYQGPRDHVLDFFQSCGFRCPTRKGTADFLQEVTSRKDQEQYWADKQRP
YRYISVSEFAQRFRRFHVGLRLENELSVPFDKARSHKAALVFSKKVVSYSELLKASFGKE
WLLIKRNSFVYISKTVMIVIIGLIASTVWLRSRMHSRNEDDGVIYIGALLFGLMVNVFNG
LAELSIAIDRLPVFYKHRDLLFYPAWVFTLPNFLLRIPISILETIVWTVMTYYTIGYAPE
ASRFFKQLLLIFLIQQMAAGMFRSIAGLCRSMIIANTGGALSVLAMFVLGGFIIPKEMIP
NWWIWGYWVSPLTYGYNALAVNEFLAPRWMTQMAPNNRPLGTAILQNANVFAEGRWYWIG
AAVLFGFSIIFNVLFTVCLMFLNPIGKRQAVISEETAREMEEVQEEGKDLQRLRRTNSKS
ESISHALSKKDGNNTSEIMMIRMSPNLSNGLNHEMSINAATGVAPKRGMILPFTPLSMSF
DEINYFVDMPPEMKEQGVTEDRLQLLRNVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRK
TGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPQVTVRESLIFSAFLRLPHEVSDEE
KMKFVDEVMDLVELDNLKDALVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSH
KIIEYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLGMDTAQYYKSSNLFQCNKALVNE
LSKPAAETSDLYFRTQCSQSSWGQFKACLWKQWWTYWRSPDYNLVRYFYTLVTALLLGSI
CWRIGHKGDNSNSLRIVIGAMYVAVMFVGVTNCATVQPLVAIERTVFYRERAAGMYSALP
YALAQVLVEIPYVLVQTMYFSLIIYSMMSFQWTAAKFLWFYFISFFSFLYFTYYGMMTVS
LSPNHQVAAILASTFYSVFNLFSGFFIPKPRIPKWWLWYYWICPLQWTVYGLIATQYGDL
ETSITVTGSVGQPKQRIKDYIKDYYGYNTGFMPVVAIVLVAFAIFFAFMFAFCIKKLNFQ
NR
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtggagcgggtgtgggattcggggcggcgggccagccagagtctgagccac
aacattagccgagggatgaacatgggcggctggggagtggaggacgtgttctcgcgcaac
agcagcactcggaggcggtccggtagcagccgcgacgacgacgaggaggccctgcgctgg
gccgccctcgagaggctgcccacctacgaccgcctccgcaccgcgatcctccggtcggcc
gccgatccgggcggcggaccgggcgaggcgcggcgccagtaccgccacaaggaggtcgac
gtgcgcaagctcggccccgccgagcgccaggagttcatcgatcgcgtcttcaaggtcgcc
gaggagggcaacgagcgattcctcaagaagcttcgagaccggatcgacaaggtcggcatc
cggttaccaacaatagaagtgagatttgagcatctaaacgtggaggccaagtgccatgcc
ggagacagagctcttccgacgctcaccaatacagtaagagacatcgcggagtccgccctc
gccctcttgggcatccgcctcactaagagaaccactctcactatcttgaaggatgtttcg
ggaatcatacaaccctcaaggatgacactcttgttaggccctccatcatctgggaagacc
accctcttgttggccttagctgggaagctcgacccaactctaaaggttagtggagagata
acatacaacgggcacagattggacgagtttgtgccacagaaaactgcagcatacattagc
cagaacgatgtccatttaggagaaatgactgtgaaagagacacttgatttctcagcaagg
tgccaaggagtaggagtaagatacgatcttctctcggagctggcgaagagggagaaagaa
gcaggaatatttccggaagccgaagtggatctcttcatgaaggccacagcaattgaagga
gtcgagagcagtcttcagacggactacacactcaggatactggggttggacatttgcgct
gatactatcgtgggagacgagatgcaaaggggcatttctggaggtcaaaagaagcgtgtc
acaacaggcgagatgatggtggggccgaccaaagtgctattcatggacgagatctcgacg
gggctggacagctccacgacctaccagatcgtgaaatgcctgcagcagatcgtccacctc
ggcgaggccaccatcctcatgtccctcctccagcccgcccccgagaccttcgacctcttc
gacgacatcctcctcctctccgagggtcagatcgtctaccagggcccccgcgaccacgtc
ctcgacttcttccaatcctgcggcttccgctgccctacccgcaagggcaccgccgacttc
ctgcaagaggtgacctcgaggaaggatcaggagcagtactgggcggacaagcagcggcca
taccgctacatttcggtctccgaattcgcccagcgattccggagattccacgtcggtctt
cgcttggagaacgagctctccgtcccattcgacaaggcccgcagccacaaggcggctctc
gtcttctctaagaaggtcgtctcctattcggagctgctcaaggcttccttcggaaaggag
tggctcctcatcaagcgaaactcctttgtctacatctccaagaccgttatgatcgtcata
atagggctcatagcctcgaccgtgtggctgaggtcacgcatgcactcgaggaacgaagac
gatggggtcatttacataggggctcttttgtttggcttgatggtcaatgtcttcaatggt
ctcgcggagttgtcaattgccatcgaccgtctgccagtattctataagcaccgggacctc
ctcttctacccagcatgggtcttcaccttgcccaattttcttcttcggatacctatctca
atcttggagaccattgtttggactgttatgacctactataccataggatatgcgccagaa
gcaagcagatttttcaagcagctgctgctaatattcttgattcagcagatggcagcaggg
atgttcagaagcattgctggtctttgtaggtccatgatcatagccaacactggtggggca
ctatctgttctcgccatgtttgttcttggaggcttcattatacctaaagaaatgattccg
aattggtggatatggggatattgggtttcaccacttacttatggttataatgctctagcc
gtgaatgagtttttggctccaaggtggatgactcaaatggctccaaataatagaccactt
ggaacggcaatccttcaaaatgccaatgtatttgcagagggaaggtggtactggattgga
gccgctgtactttttgggtttagcatcatcttcaatgtcctattcacagtgtgcctgatg
tttttgaaccctattggaaaacgacaagctgttatatctgaagaaacggcaagggagatg
gaagaagtccaagaggaaggaaaggatttacaaagacttagaaggacaaattctaagagt
gagtctatatctcatgctttgtcaaaaaaggatggaaacaacaccagtgaaattatgatg
attcgaatgagtcctaatctctcaaatggacttaatcatgaaatgtccatcaatgcagcc
acaggtgttgctcctaagagaggaatgattcttccttttacacctctttccatgtccttt
gatgaaatcaattactttgtcgatatgcctccagaaatgaaggagcaaggagtcacagaa
gataggctccaattgctaaggaatgttacaggggcttttagaccaggagtcttaacagcc
cttatgggagttagtggtgctggtaaaaccaccctgatggatgttttggctggaagaaag
actggtggctacattgagggtgacatcagaatctcagggtaccctaagaaacaagagact
tttgcaagaatttctgggtattgtgagcaaaatgatatccactcacctcaggtgacagtc
cgagaatctttgatattttctgcttttctccgccttccacatgaagtcagtgatgaagaa
aaaatgaaatttgttgatgaagtgatggacctagtggagcttgacaacctgaaagatgcc
ttagtgggtcttccaggagtaactgggttgtccactgaacaaaggaagagactgacaata
gcagtagagcttgttgctaatccttctatcatcttcatggatgaaccgacatctggtctt
gatgcaagagcagcagctattgtcatgagaactgtgaggaacacagtcgatactggaaga
actgttgtttgcacaatccaccaaccaagcatagatatatttgaggcctttgatgagctt
ctgctaatgaaaagaggtggtcaagtgatatactctggacccctgggaagaaattctcac
aagataatcgaatactttgaggcaattcctggagttccaaaaatcaaggacaaatataat
cctgcaacatggatgttagaggtcagctcagttgctgctgaagtacgtttgggaatggac
actgctcagtattataaatcatcaaatctgttccagtgcaacaaagcattggtgaatgag
ctcagtaaaccggctgcagaaacaagtgatctgtacttccgtacacagtgttcacagtca
tcgtggggacagttcaaagcttgcctctggaagcagtggtggacttactggagaagccct
gattacaaccttgtcagatatttctacaccttggtcactgctctactgttaggctccata
tgttggaggattggtcataagggggataattcaaacagtcttagaattgtcattggagct
atgtatgtagcagttatgttcgttggtgtcactaactgtgccactgtgcaaccacttgtt
gcaatcgagaggactgtcttttatagggaaagagcagctggaatgtattcagccttacca
tatgcccttgctcaggtgcttgtggaaataccatatgtgctagttcaaaccatgtacttt
tctcttattatatactccatgatgagcttccaatggacagcagcaaaattcctttggttc
tacttcatctccttcttctctttcctgtacttcacttactatggaatgatgactgtctca
ctctcaccaaatcatcaagttgctgcaatcctagcatccacattctactcggtcttcaat
ctcttctctggctttttcattcctaaaccaagaattcccaagtggtggctgtggtactac
tggatttgcccacttcaatggacagtttatggactcatagcaacccaatatggtgacctg
gaaactagtatcacagtgactggatctgtagggcaaccgaagcaaaggattaaagactat
atcaaggactactatggatacaatactggcttcatgcctgtagttgccattgtgctagtt
gcctttgccatcttctttgctttcatgtttgcattctgtatcaagaagttgaacttccag
aacaggtag
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integrated database retrieval system
