Zingiber officinale (ginger): 121971890
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Entry
121971890 CDS
T08725
Name
(RefSeq) actin-related protein 4-like
KO
K11340
actin-like protein 6A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121971890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121971890
03036 Chromosome and associated proteins [BR:
zof03036
]
121971890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121971890
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121971890
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121971890
Chromatin remodeling factors
BAF complex
121971890
PBAF complex
121971890
GBAF(ncBAF) complex
121971890
SRCAP complex
121971890
INO80 complex
121971890
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
121971890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Ppx-GppA
Motif
Other DBs
NCBI-GeneID:
121971890
NCBI-ProteinID:
XP_042379324
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All DBs
Position
4A:complement(158312693..158332770)
Genome browser
AA seq
436 aa
AA seq
DB search
MYGGDEVSAIVLDLGSYTCKAGYAGEDSPKAVFPSVVGSIDQVGVVDEVKPEKDSEITYD
SKNADKTKTRKLYVGSQALGYRRDQMEVISPFKDGVVDWDIVDNIWNHAFRECLLIDPKE
HPMLLAEPSSNTPQQREKAAELMFESYKVPALFVAKNAVLTSFSSGRATSLVVDSGGGST
TVAAVHDGFVLQKAVLTSPVGGELLTDCMMKSLESKGTTLRPRYSFKKKEIRQGEFQIIN
LDFPNTTESYKLYSQRAIASDIKESVCRVPDTAFEETAYANVPMTSYELPDGQTIEVGAD
RFKIPDILFNPSLVLTIPGMESFTSSTSVSGLSQMVIESINRCDVDIRRELFSSILLAGG
TASMLQLKERLEKDLMEEAPQAARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSK
AEYEEHGVSYIQRRCP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggggcgacgaggtctcggcgatagttctggacttgggctcctacacatgcaag
gctggctacgccggagaggactccccgaaggccgtttttccatctgttgttggatcaatt
gatcaagtgggagttgttgatgaggttaaacccgagaaagactccgaaatcacgtatgat
tctaaaaatgctgacaagacaaagacaaggaagctatacgtaggctcccaagccttaggg
tatagacgtgatcaaatggaggtgatatcacctttcaaggatggagttgtagattgggat
attgttgacaatatatggaatcatgcattcagggaatgccttctaattgatccaaaggag
catcccatgctgcttgcagaaccatcatcaaacactccccagcaaagagagaaggcagca
gagcttatgtttgagagttataaagttcctgctttatttgttgcaaaaaatgctgttctt
acctctttttcttctggacgtgctacatctttggttgttgacagtggtggtgggtccaca
actgtagctgctgtgcatgatggttttgtgctccaaaaggctgttttgacatccccagtt
ggtggtgaattattgactgactgcatgatgaaaagcttggaaagcaaaggcacaacgtta
agacctagatattcatttaagaagaaagaaatacgccaaggagagtttcagatcattaat
cttgactttccaaatactactgaaagttacaagttgtactcacagcgagctattgccagc
gatattaaggaatctgtctgccgagttcctgatactgcttttgaagaaactgcttatgca
aatgtacctatgacttcttatgagcttcctgatgggcagactatagaggttggggcagat
agatttaagattcctgatatcttgttcaacccatcgctagtgctgacgattcctggaatg
gagagctttaccagttctacttctgttagtgggctttcacaaatggttattgaaagcata
aacagatgtgatgtggacatcagaagggaactatttagcagtatattgcttgctggtggc
acagcatcgatgctgcagttgaaggaacgtcttgagaaggatttgatggaggaagcccct
caagccgcacgtgttaaagtattggcgagtggaaattcaaccgagaggcgattcagtgtg
tggataggagggagcattttagcatcacttggatcatttcagcaaatgtggttctccaag
gcagaatacgaagagcatggagtttcatacatccaaagaagatgcccttaa
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