Zingiber officinale (ginger): 121971914
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Entry
121971914 CDS
T08725
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121971914
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121971914
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121971914
04121 Ubiquitin system [BR:
zof04121
]
121971914
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121971914
Peptidases and inhibitors [BR:
zof01002
]
Metallo peptidases
Family M67
121971914
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Others
121971914
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121971914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
121971914
NCBI-ProteinID:
XP_042379367
LinkDB
All DBs
Position
4A:158893183..158909709
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AA seq
507 aa
AA seq
DB search
MKPSAGEIKISESAKRLDVDNRISLSFYYRIAHNLLRQADIYRSEKDIIDLYVMLMRFSS
LIKETIPHHKDFQVILHDEKLYFRKRLLSALNELEALKPDVKHQLEELNRRNRNQLTTWG
QLPQDGSRNESFDWPSIKNYNTTQADRMVARDGLYRNSNVQGGKILTKSKSQFNKLSFNI
PLPKEETLSRHSILGPNGLNGRWQPPSVDRGIQYPSNLDLTPIEMPSVLHQPTEDKPEAV
KENVTLEKERSILEDVLSLQDTSTHQPEEPGPMINLDTFVETPKMEIIKELCPPPVLAEV
HDVAITPQVSHSSNEQTVSLQNDLIPAESPQEVHISIALMESFMRLAKSNTTRNLETCGV
LAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFDYQDKQALFPLGWIHTHPTQSCFM
SSIDVHTHYSYQIMLPEAIAIVMAPKDSSRKHGIFRLTTPGGMSVIKQCQQRGFHPHQPP
PDGGPIYDHCPDVYMNPKLKFDVVDLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttctgccggggagatcaagatctcggagagcgccaagaggcttgatgttgac
aatcgtatctccctcagtttctactatcggatagcccataatcttctcagacaggcagac
atttaccggagcgagaaggatatcattgatctttatgttatgcttatgagattctcaagt
ttgattaaagagactattccacaccataaagattttcaggtgatattgcacgatgaaaaa
ctttatttcagaaagagattgttaagtgccttgaatgagctagaagcgttgaagcctgat
gtaaaacatcagcttgaagaattgaataggaggaacagaaaccaactaactacttgggga
caattgccacaagatggttctcgaaatgaatcatttgattggccatcaatcaaaaactat
aacaccactcaggctgatagaatggttgcacgagatggcttatacaggaattctaatgtt
caaggaggcaagatattgacaaaatccaaatctcagtttaataaactatctttcaatatc
ccacttcccaaagaggaaaccctatcaagacactcgattttgggtcctaatggtcttaat
ggacgatggcagccaccgagtgttgaccgtggaattcaataccctagcaatttggactta
acgccaattgagatgccaagcgtgcttcatcaaccaacagaggataaaccagaggcagtt
aaggaaaatgtaactttggagaaggaaagatccatacttgaagatgttctttccttacaa
gatacttcaactcatcaacctgaagaaccaggtccaatgattaacctggatacttttgtt
gagactcctaagatggagattatcaaagaactctgtcctccgccggtcctggcagaagtt
catgatgtcgccataacaccacaagtttctcattcctcaaatgaacaaactgtttctttg
cagaatgatctaattcctgctgaatcacctcaggaagttcacatatcaattgctttgatg
gagagttttatgagacttgcgaaatcaaatactaccagaaacttagaaacttgtggagtt
cttgctggttcccttaaaaacagaaagttctatgtgacagctctcatcatcccaaagcag
gagtccacatctgattcatgtcagacaacaaatgaagaagaaatatttgattatcaggac
aagcaagcacttttccctcttggatggattcacactcatcctactcagtcatgttttatg
tcttcgattgatgtacacacccattattcctaccagattatgttgcctgaggcaattgca
attgtaatggcaccaaaagacagttccaggaagcatgggatatttcggctgaccacaccg
ggaggtatgtcggtcatcaagcaatgccaacaacgaggtttccatcctcaccaaccaccc
ccagacgggggccctatctatgaccactgccctgatgtctacatgaaccctaaactcaag
ttcgatgtagtggacctccgttga
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