Zingiber officinale (ginger): 121971962
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Entry
121971962 CDS
T08725
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121971962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121971962
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121971962
Pre-60S particles
121971962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_6
Importin_rep_4
HEAT
TOR1L1_N
MMS19_C
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
IFRD
RIX1
Cnd1
Htt_N-HEAT_1
Arm
Adaptin_N
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
PPP2R1A-like_HEAT
DUF6720
Motif
Other DBs
NCBI-GeneID:
121971962
NCBI-ProteinID:
XP_042379449
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Position
4A:160084816..160100749
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AA seq
1121 aa
AA seq
DB search
MDQQQQQQQIAVILGSAESGPFESLIGQLMSAANEQRSHAESLFNLCRDLHPDALALKLA
AVLHASPALDFRAMSAVLLRKLLTHRDSDAPFWPRLSSASQTSLKSLLLAVLHQESDRST
AKKVADTISALAVSLLPDSAWPDLLPFLFHSVSASDTPPRLQESALLIFAQIAYVLADDA
SFIGSHLPTLHTLLLAALSHPSSPDVRVAALSAAVNLVTSLESAADRNRLADLLPPMMRT
LTESLNSGNEATAQEALELLVELAGAEPRFLRRQIGDVVGAMIQIAEADGLEEGTRHLAI
EFIITLAEARERAPGMMRKLPQFLSRLFSVLMKMLLDLEDDPAWYTAEVQDEDAGETSNY
GVAQECLDRLAIAVGGNTIVPVASELLPAFLAASEWQKHHAALIALAQIAEGCSKVMLKN
LEQVVTMVLCSFQDPHPRVRWAAINAIGQLSTDLGPDLQTQYHQRVLPALASAMDDFQNP
RVQAHAASAVLNFCENCTPDILTPYLDGIVGKLLVLLQNGKQMVQEGALTALASVADSSQ
EQFQKYYDAVMPYLKAILMNATNKSNRMLRAKSMECISLVGMAVGKEKFRDDAKQVMEVL
LALQGSQVETDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSAG
SDDDIDDSDDESVETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFYPWIDQVAP
TLVPLLKFYFHEEVRKAAVAAMPELLRSAKLAVEKGQAQGRDESYIKQLSDYIIPALVEA
LQKEPETEICASMLDSLNECMQLSGSLLSEDQVRSIVEQIKHVITASAARKKERAERTKA
EDFDAEEEEILKEENEQEEEVFDQIGDCLGTLIKTFKASFLPFFDELSLYITPMLGKDKT
PEERRIAICIFDDVAEQCREAALRYYDTYLPFLLEACNDDNADVRQAAVYGVGVCAEFGG
SVFRPLVGEALFSLNNVIGHPDALQSDNVMAYDNAVSALGKICQFHRDGIDAAKVVPAWL
SCLPIKNDLIEAKIVHEQLCSMVERSDRELLGPNNQQIPKIVAVFAEVLCGGKDLATEQT
VSRIISLLRQIQQTLPPAVLASTWSTLQPQQQLALQSVLSS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaacaacagcagcagcagatcgccgtgattcttggctcggcggagtccggc
cccttcgaatctttgattggtcagttgatgtccgcggcgaacgagcagcgctcccacgct
gagtcgcttttcaacctctgccgcgacctccatccggacgccctcgccctgaagcttgct
gccgtcctccacgcctcccccgcccttgacttccgcgccatgtccgccgtccttctccgc
aagctcctcacccaccgtgactccgacgctccgttctggccccgcctctcttccgcctcc
cagacctcgctcaagtccctcctcctggccgtcctccaccaggagtccgaccgctccact
gccaagaaggtcgctgacaccatctccgcccttgctgtctccctcctccccgactccgcc
tggcctgatcttctccccttcctttttcattctgtctctgcctccgacacccctcctcgc
ctacaggagtctgccctcctcatctttgcccagatcgcatatgtcctcgccgacgacgcg
tccttcattggctctcacctccccacccttcacactctcctcctcgccgccctctcccac
ccttcctctccagatgtccgcgtcgctgcactgtctgcggccgtcaaccttgtcacttcc
ttggagtctgctgctgatcgtaaccgcctagctgacctcctccctcccatgatgcgaacc
cttactgagtctctcaactctggtaacgaagctacagctcaggaggcccttgagctcctt
gtcgaacttgcaggtgcagagccacggtttcttcgtcgtcagattggtgatgttgttgga
gccatgattcaaattgctgaggcagatggactcgaggagggtacacgacacttggctatt
gagtttatcatcactcttgctgaagcgagggagcgtgcccctgggatgatgcggaaacta
cctcagtttcttagcagactcttttctgtgctcatgaagatgcttcttgatttagaggat
gatcctgcttggtacactgctgaggttcaggatgaggatgctggggaaactagcaactat
ggtgttgcacaggagtgtcttgaccgtcttgcgatagcagttggtggaaacacaatcgtt
ccggtagcctctgagctgttaccagctttcctggctgcttccgagtggcagaaacaccat
gctgcccttatcgcccttgcacagattgctgagggttgttcaaaggtgatgttaaaaaat
ttggagcaagtggtgaccatggtcctatgctcttttcaagatcctcatccacgtgttcgt
tgggcagcaattaatgctattggacagttatccactgatttggggccagatctccaaact
cagtatcatcagagggtgcttccggcattggcatcagcaatggatgattttcagaatcct
cgtgtgcaggctcatgcagcttcagctgttctaaatttctgtgaaaattgcactcctgat
attttgacaccttacctagatggaattgtaggaaagttacttgttctgctacagaatggg
aagcagatggttcaagaaggagctttaacagctttagcttcagttgcagattcatcacaa
gaacaatttcagaagtactacgatgctgttatgccttacctcaaagccatattgatgaat
gcaactaacaaatcaaacagaatgcttcgtgcaaaatcaatggagtgcataagtttggtg
ggaatggcagtgggcaaggagaagttcagggatgatgctaaacaggtaatggaagttttg
ctggcactgcaaggatcacaagtggagacagatgaccctactacaagctatatgcttcag
gcatgggccaggttatgcaaatgtctagggcaggattttctaccgtacatgagtgttgtt
atgcctccattgcttcaatccgcccaactgaaaccagatgtaactatcacatctgcaggc
tcagatgatgacatagacgattcagatgatgaaagtgttgagaccattactcttggagat
aaaaggataggaattcggacaagcgtgttggaggagaaagccactgcttgtaacatgctt
tgttgctatgctgacgagctaaaagagggattctatccatggattgatcaggttgcccca
acattggtacctctacttaaattctatttccatgaagaagtaaggaaggctgctgttgca
gctatgccggaattactacgatctgcaaaactagcagttgagaaggggcaagcacaaggt
cgtgatgaatcatatattaagcaattatcagactacataattccagctcttgttgaagca
ttgcagaaggaaccagaaacagaaatctgtgcaagcatgcttgattcactgaatgagtgc
atgcagctaagtggatcacttcttagtgaagaccaagtcagaagcatagttgaacagata
aaacatgtgataactgcaagtgcagctaggaaaaaggaaagggcagaaaggaccaaagcc
gaggattttgatgcagaggaagaggaaatcctcaaggaagaaaatgaacaggaggaagaa
gtctttgatcagattggggattgccttggaactctgattaagaccttcaaggcatctttc
cttccgttctttgatgagctctctctttatattactccgatgctggggaaggataaaaca
cccgaggagagaaggattgccatttgcatctttgatgatgttgcagaacaatgccgggaa
gcagctcttagatattatgatacctaccttcctttccttttagaagcatgtaatgatgat
aatgcagatgttaggcaggctgctgtttatggtgttggtgtttgtgctgaatttggtggt
tctgtgtttcggcctttggttggagaggctctctttagtttgaataatgtgattggacac
cctgatgcattgcaatcagataatgtaatggcatatgataatgctgtttcagcacttgga
aaaatatgccaatttcatcgtgatggtattgatgcagcgaaggtcgtcccagcttggttg
agttgcttgccgataaagaatgatttaatcgaggccaaaattgttcatgagcaactttgt
tcgatggtcgaaaggtcagatagagaacttttgggtccaaacaatcagcaaattccaaaa
atagttgctgtgtttgcagaggtcctgtgcggagggaaggatctggctacggagcagact
gttagtagaatcatcagtctcttgaggcaaattcaacagacgctgccaccggctgtcctt
gcttcaacctggtccaccctgcagcctcagcaacagctcgccttgcaatctgtattatct
tcttaa
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