Zingiber officinale (ginger): 121972048
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Entry
121972048 CDS
T08725
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03020
RNA polymerase
zof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121972048
09124 Replication and repair
03420 Nucleotide excision repair
121972048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121972048
03400 DNA repair and recombination proteins [BR:
zof03400
]
121972048
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121972048
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121972048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF7219
Motif
Other DBs
NCBI-GeneID:
121972048
NCBI-ProteinID:
XP_042379573
LinkDB
All DBs
Position
4A:161457574..161468776
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AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIDDLDKELDYLKKSFEDEKNREDEKLRQGY
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctgaccgttatgaacgattcgttgtgcctgaaggtaccaaaaaggtttca
tatgagagggacaccaagattgtgaatgcagctgctttcactattgaacgtgaagaacac
actgtaggaaacatccttcgaatgcaattgcacagggaccctaatgtgctcttcgcaggc
tacaagctccctcatcctctgcagtacaaaatcatagttcggatccaaacaacgagtcag
tcttctccgacacaagcttatacacaggcaattgatgatcttgacaaggagcttgactat
ctgaagaaatcttttgaggacgagaagaatcgggaggacgagaagttgaggcagggatat
taa
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