Zingiber officinale (ginger): 121972088
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Entry
121972088 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121972088
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121972088
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121972088
03036 Chromosome and associated proteins [BR:
zof03036
]
121972088
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121972088
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121972088
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121972088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
COQ7
HEAT_EF3_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
121972088
NCBI-ProteinID:
XP_042379634
LinkDB
All DBs
Position
4A:162049079..162053081
Genome browser
AA seq
508 aa
AA seq
DB search
MLKQILSRLPKKSSKSLDSSSVGGPIPPSSSSSSRSGDLQASRFASLDGQVPPGSSSGLN
HLNRHSLLVNSRLDGNYANYEALPSFKDVSALERQGLFMRKLELCCVVFDFTDPTKNLKE
KEIKRQTLLELVDYVTSGSGKLPENAIQEATRMVSTNLFRNLALPPREHMVLEKIDAEEE
EPAMDPAWPHLQVVYEFFLRFVASPDTDAKVAKRYIDHSFVLKLLDLFDSEDPRERDYLK
TILHRVYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIISGFALPLKEEH
KLFLVRSLIPLHKPRCVAMYHQQLSYCITQFIEKDCKLADTVIRGLLKYWPITNSTKEVM
FLGELEEVLEATQPADFQRFMVPLFQKIARCLNSSHFQVAERALFLWNNEHIENLIKHNI
KVILPIIFPALERNSKSHWNQAVQSLTLNVRKLLSDHDPDLFAECLKKFEEDEAKHMEIV
SKREATWKRLEEVAASHTTNKEAAAQHT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcagatactaagccggctcccgaagaaatcttcgaaatcactggacagtagt
tctgttggtggaccaattcctccatcctcatctagcagctcaaggagtggagatttgcaa
gccagtaggtttgcaagtcttgacggtcaagtccctcccggatcaagttctgggctaaat
catctaaacagacattcgctactggttaattctagattagatggaaattatgccaactat
gaagctctgccgagtttcaaggatgtttcagctttggagaggcagggtttgttcatgagg
aagttggagttgtgttgtgtcgtgttcgactttactgacccgacgaagaacttgaaagag
aaagaaataaagcggcagacattgttggagcttgttgattatgtgacttcaggaagtgga
aagctaccggagaatgcaattcaagaggcaaccaggatggtgtcgaccaacttgttcaga
aatctagctcttccacctcgggagcacatggttttagaaaaaatcgatgctgaagaagaa
gaacctgcaatggatccagcatggcctcatttgcaggttgtctatgagttctttcttcgg
tttgttgcatctcctgacactgatgctaaggtagcaaaaaggtatatagatcattccttt
gttcttaagctccttgacctcttcgattctgaagatcctagagagagggactatttaaag
acgatacttcaccgtgtttatggcaaatttatggtgcatcggcccttcatcagaaaagct
ataaacaacatattttatcgatttatcttcgagaccgagaagcacaatgggatcgcagaa
ctattggagattttagggagtatcatcagtgggtttgccttgccattaaaagaagagcat
aagctgttcctggtacgctcactaatcccacttcacaagccaaggtgtgtcgcaatgtat
catcagcagttatcatattgcataacacaatttatcgagaaggattgcaaacttgctgat
actgttataagaggtttattgaaatattggccaattacaaatagcacaaaagaagttatg
ttcttgggtgagttagaagaggtgctagaagcaacgcagcctgcagatttccagcgattt
atggttccactcttccaaaagattgctcgatgcttgaatagttctcactttcaggtggca
gaaagggcattgtttctttggaataatgagcacatcgagaacttgatcaaacataatatc
aaggttatattgcctatcatcttccctgctctggagagaaactcaaaaagccactggaac
caagctgttcagagtctcaccctcaacgtgcgcaaactattatccgatcacgaccctgat
ctgttcgcagagtgcttgaagaagttcgaggaagacgaagcaaaacacatggaaatcgtt
tcaaaacgcgaagccacttggaagcgcctcgaagaagttgctgcttcgcatactacaaac
aaggaagcggcagctcaacatacttga
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