Zingiber officinale (ginger): 121972093
Help
Entry
121972093 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121972093
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121972093
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121972093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
vWA-TerF-like
TerY_C
Sina_RING
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121972093
NCBI-ProteinID:
XP_042379643
LinkDB
All DBs
Position
4A:complement(162080390..162087041)
Genome browser
AA seq
447 aa
AA seq
DB search
MGGGSSRDSGERDWNYDSSSYSPREAPGYQSYPPPAAPSSYAYPPPPSYAPPPSYAPSPS
HSEPPQPQGGRRIDRRYSRISDDYHTVDQVTDALSRAGLESSNLIVGIDFTKSNEWTGKV
SFGRRSLHHIGDTHNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQGVFSFYPDGR
PCNGFQDALQRYRELVPHLRLAGPTSFAPLIEMAMTIVEQSGGQYHVLVIIADGQVTRSV
DTHSGHLSSQEQKTVDAIVKASGFPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVN
FTEIMSRNIPQPRKEAAFALAALMEIPSQYKATLELGILGRQSGKSPQKVPLPPPNGGYN
ASSVSSNNYKSTSFQRSAPLYPEYETTSSAPPEPPSSSLESQVCPICLTNPRDMAFGCGH
LTCSQCGPSLLTCPICRRDISTRIKLY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggggtggaagctctagggattcgggagagagggattggaattacgacagtagtagt
tattctcctcgcgaggcgcctggctatcagagttaccctcctcccgctgcgccttcgtcc
tacgcttatcctcctcctccgtcttatgctcctcctccttcttatgctccttctccctct
catagcgaaccccctcagccgcagggtgggcggaggatcgacaggaggtactcgaggata
agcgacgactaccataccgtggaccaagtcactgatgctctttcaagggctgggctcgag
tcttccaatcttattgttggcattgatttcacaaagagcaatgagtggacaggtaaagtt
tcatttggcagaagaagcttgcatcatattggtgatacacacaatccttatgaacaagct
atttctataattgggagaaccttatcagcatttgacgaagacaacttgattccatgcttt
ggatttggagacgcatccacgcatgatcagggtgtctttagtttttaccctgatggaaga
ccatgtaatgggtttcaagatgctttgcagcgatatagagagcttgtgccccatttgcgt
ctggcaggtccaacctcttttgcaccactaatagaaatggctatgaccattgtagaacaa
agtggtggtcaataccatgttttggtgataattgctgatggtcaggttacaagaagtgta
gacactcattctggtcatttaagctcccaagaacaaaagactgttgatgccatagttaaa
gcaagtggatttccactgtccataattttggttggagttggagatggcccttgggacatg
atgaaagaatttgatgataatatccctgcccgtgcgtttgataattttcagtttgtcaat
tttacggagataatgtcaaggaacataccccaacccagaaaagaagcagcatttgctctt
gctgcattgatggaaattccttcccagtacaaggcaactctagaactggggattttgggt
cgtcaatctggaaaatctccacagaaggtccctcttcctccgcctaatggaggttacaat
gcatcatctgtttcaagtaacaattacaaatcaacaagcttccagaggagtgcgccactc
taccctgaatatgaaacaacatctagtgcacctcctgaaccacccagttcatcattagaa
tcccaggtatgccctatttgcctcacgaatccgagagacatggccttcggctgcggacac
ctgacgtgttcacaatgtggacctagtcttctgacatgcccgatctgccgtagagacatc
agtaccaggataaagctctactga
DBGET
integrated database retrieval system
