Zingiber officinale (ginger): 121972117
Help
Entry
121972117 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121972117
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121972117
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121972117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121972117
NCBI-ProteinID:
XP_042379696
LinkDB
All DBs
Position
4A:162311114..162314071
Genome browser
AA seq
183 aa
AA seq
DB search
MVMPPSGDVCCVCHERFRLPCQANCSHWFCGNCILRVWNSGFVLQPCKCPLCRRAITLLI
PASTINEDHDREAYQVLQSIENYNRQFGRNPSLIQRFQDVPFFIRRLLREFVDPQRALPF
VFRARTALSILLSIGYVASPIDILSERIYGFVGFLDDFLVLVIVFIHLATLYRSLLLNRH
GGA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggttatgccgccgtccggcgatgtgtgctgcgtctgccacgagcggtttcggctcccc
tgccaagccaactgttcgcactggttctgcgggaattgtattctgagggtctggaattct
ggatttgtgctccagccatgcaagtgccccctatgccgtcgtgctataactctgcttata
cctgcatcaacgataaatgaggaccatgaccgggaagcttatcaagtacttcagagtatt
gagaattacaatcgccagtttggcagaaaccccagccttattcagaggtttcaggatgtt
ccattcttcataagaaggttattgagagaatttgtggatcctcagagagcacttcccttc
gtcttcagagcacgaacagccttgtctatattactgagcattggttatgttgcgagcccc
attgacattttatcggaaaggatttatggttttgttggttttctcgatgattttttagta
ctggtgattgtgttcatccaccttgctactctgtatcgcagtttacttctgaaccgccat
ggaggtgcttaa
DBGET
integrated database retrieval system
