Zingiber officinale (ginger): 121972308
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Entry
121972308 CDS
T08725
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121972308
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121972308
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
BsuPI
Motif
Other DBs
NCBI-GeneID:
121972308
NCBI-ProteinID:
XP_042379926
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Position
4A:25597163..25600411
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AA seq
614 aa
AA seq
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MDNGIVRLTLSNPEGFITEVMYNGVDNLLEVHSSEPYGGYWDVVWNEEENEEIFELIEGS
QFQIIYQDDKKIEVSFKKKWNPSLKGKRSPLNIDKRFVLLQGSSGFYTYAIYEHVKGWPD
FQITETRIAFKLRKEKFHYMAIADNRQRVMPMLQDRSPKRSQKLAYPEAVILVKPTNPAL
RGEVDDKYQYSSEYKDSLVHGWICAKPSIGFWLITPSNEFKSGGPLRQDLTSHVGPTVLG
MFHSSHYAGEEIVAKFTNGEYWKKVFGPVFIYLNSDLKNSRPNFLWEDAKRQTQIEVANW
PYEFPTSVDYLKKEQRGSVSGRLLILDKYISKNYIYGNATFVGLASPGEEGSWQKETKGY
QFWVRANAKGNFFIKNVLSGVYNLYAWLPGFIGEFTYSTTITVTSGGNIDLHNLVYRPPR
DGPTLWEIGIPDRSAAEFFVPDPNPKYVNKLYIEHDKFRQYGLWEKYADLYPTTDLIYQV
GVSNYTKDWFFAQVTRKQKDNSNKATTWQIKFQLSSLHRTGVYKLRVALASAHLSKLQVR
INDPTIEPAHFTTELIGRDNAIARHGIHGFYWLFNISLQGSWLREGENTIFLTQSQSQTM
FQGIMYDYIRMEAT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggcattgtccggctgacattgtcaaaccccgaaggctttatcactgaagtt
atgtacaatggagttgataatttactggaagttcatagtagtgaaccgtatggaggctac
tgggatgttgtttggaatgaagaggaaaatgaagaaatatttgaattaatagaaggaagt
caatttcaaataatatatcaagatgacaagaaaattgaagtgtctttcaagaagaagtgg
aatccctccctcaaaggcaagcgttctcctctcaacatagacaaaagatttgtattattg
caaggtagctcaggattctacacatacgccatctatgagcatgttaaaggatggccagac
ttccaaataacagaaactagaatagctttcaagcttagaaaagagaagtttcattacatg
gcgatcgcagataatagacaaagggtcatgcctatgcttcaggatcgttcgcctaagaga
tctcagaagttagcctaccctgaggcagtcatccttgttaaaccaactaatccagccctt
agaggagaggtggacgacaaatatcaatactccagcgagtacaaagacagcttggtgcat
ggatggatttgtgctaagccttctattggcttttggttaatcactccgagtaatgagttc
aagtcaggaggacctctcagacaagatttaacatctcatgttggccctactgtcctcggt
atgttccatagctctcactatgctggggaagaaattgttgctaaatttacgaatggtgaa
tactggaagaaagtgtttggcccagtattcatctaccttaattctgacttgaaaaactca
agaccaaactttctttgggaggatgctaaaagacagacccaaattgaagtggcgaattgg
ccttacgagtttccaacttcagtggattatcttaagaaagagcaaagaggatctgtttct
ggaaggctacttattttagataagtacattagtaaaaattacatatatgggaatgcaact
tttgttggtttagcttctccaggagaagaaggatcttggcaaaaagaaaccaagggatac
caattttgggtaagagcaaacgccaaaggaaatttctttataaaaaatgttctctctgga
gtttataatctgtatgcatggcttcctggtttcattggagaatttacttatagcaccaca
atcacagtcacctcaggaggtaatatcgacttacacaaccttgtatatagaccaccaaga
gatggcccaaccttgtgggagattggcattcctgatcgctctgctgcagagttctttgtt
cctgatccaaatcctaaatatgtcaataaactttacattgagcacgataagtttagacaa
tatgggttatgggagaaatatgcagatttgtatcctacaactgatttaatttaccaagtt
ggtgtcagtaattatacaaaagactggttctttgctcaagttaccaggaagcaaaaagat
aattccaataaagcaacaacatggcagataaaatttcaactttctagtttacataggact
ggagtttacaagctcagggtggcacttgcttctgcacacctttctaaactacaagttcga
atcaatgacccgactatagaacctgctcacttcacaacagagttgattggtcgtgacaat
gcaattgcaaggcatggaatccatggtttttattggttgttcaacattagtttacaagga
agttggcttcgtgaaggggaaaacacaatattcttgactcaaagtcaatcccaaaccatg
tttcaaggaatcatgtatgactatatccgaatggaagcgacatag
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