Zingiber officinale (ginger): 121972888
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Entry
121972888 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RNF144A-like
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121972888
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121972888
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121972888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
IBR_2
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121972888
NCBI-ProteinID:
XP_042380440
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Position
4A:144269930..144270817
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AA seq
295 aa
AA seq
DB search
MEAEQFSDLIHLVDDSYFSALSSAGEELFPISDEKYAEQLQFQEVLISASQMARPPASTL
IRIREKGESSSSSSSSSLASPSPATFFCKICMDAPPDADMFTNGSCSHSFCRDCLGRYVG
EKIKENILTVKCPEVNCRSILEPQSFRGMIPREVLDRWEAAACEATILGMNRIYCPFKGC
SAALVVDDEDGGVAALKEAECPHCRRLFCASCKVGWHAGLSCSEFQRLGTDERRREDLLL
MEVAKEKGWRRCPKCKFFVEKTAGCLHITCRCGHEFCYGCGSKWATIHASCSTPN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagagcagttctccgacctgattcacctggtcgatgactcgtacttctcggcg
ctgtcctccgccggcgaagagctttttccgatctccgacgagaagtacgccgagcaactt
cagtttcaggaagttctcatttctgcatcccaaatggctaggccaccggcttccacctta
attaggatcagggagaagggtgagtcttcgtcttcatcttcgtcttcgtctctggcttcg
ccttctccggcaactttcttctgcaagatctgcatggatgcacctcccgacgccgatatg
ttcactaacggcagctgctcccactctttctgccgcgactgcctcggtcgctacgtcggc
gaaaagattaaggagaatatattgacggtgaaatgcccggaggtcaactgcaggagcatc
ctcgagccgcagagtttccgcggcatgataccccgcgaggtgctcgaccggtgggaggca
gcggcgtgcgaggccaccatcctcggaatgaaccggatttactgcccgttcaagggatgt
tcggcggcgttggtggtggacgatgaggacggcggagtggcggctttaaaggaggccgag
tgcccgcactgtcggcgactgttctgcgcgtcgtgcaaggtgggatggcacgccgggttg
agctgctcggagttccagaggctggggacggacgagaggaggagggaagacttgctgctg
atggaggtggcgaaggagaaggggtggaggcggtgccccaagtgcaagttcttcgtggag
aagacggccggatgcctgcacatcacttgcaggtgtggccacgagttctgctacggatgt
ggatcaaaatgggcaacaattcacgcgagttgcagtactccaaattaa
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