Zingiber officinale (ginger): 121973648
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Entry
121973648 CDS
T08725
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121973648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121973648
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121973648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
Tau95
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
121973648
NCBI-ProteinID:
XP_042380972
LinkDB
All DBs
Position
4A:complement(127045108..127047009)
Genome browser
AA seq
258 aa
AA seq
DB search
MEDDGGIPLDTARAERPVWLLKCPPAASRALQSAASGSVSSTSPNPVVAKIVHTIDLFNL
DDPSSEQFNLEMVPNDSGNAPRSYKLNASKDFVPMSTFSESNQGKLSVEGKVKYKFDMEP
QNFRDYSKICRERTNKSMIKTRKVQVIDNDHGGLMRPMPGMVGLVSSGSKDKKKVTPSKG
SDAKRTRRDKGEMLNILFKLFERQPNWALKQLVQETDQPEQFLKEILNEICVYNKRGPNQ
GTHELKAEYKNFGGTNNE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatggtgggattccgctggatacggcgcgagcagagcgaccggtgtggctg
ttgaagtgtccgccggcggcgtcgagggcattgcagtcggccgcctccggctccgtctcc
tccacctcccccaaccccgtcgtcgccaagatcgtccacaccatcgatctcttcaacctc
gacgatccctcatccgagcagtttaacttggaaatggttccaaatgattctggtaatgcg
ccgaggagttataaactgaatgcgtccaaagattttgttccgatgtctactttttctgag
tctaatcaaggaaagctctcggtggaggggaaggtaaagtataaatttgacatggagcct
caaaatttcagggattatagtaaaatatgtcgcgaaagaacgaacaagtctatgattaag
accagaaaagtccaggttatcgataatgatcatggagggcttatgaggccgatgcctggc
atggttggcctagtttcatctggttcaaaggacaagaaaaaagtaactccatctaaagga
tcggatgcaaagaggacccgcagggacaaaggcgaaatgttgaacattctctttaaatta
tttgaaagacaaccaaattgggcgttgaaacaattggtccaagagactgaccaacctgag
caattcctaaaagagatattaaacgagatttgtgtgtacaacaagagaggacccaatcaa
ggaacccacgagctcaaagcggaatacaagaattttgggggaaccaacaatgaatga
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