Zingiber officinale (ginger): 121974402
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Entry
121974402 CDS
T08725
Name
(RefSeq) sorting nexin 1-like isoform X1
KO
K17917
sorting nexin-1/2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121974402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121974402
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zof04990
]
121974402
Membrane trafficking [BR:
zof04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121974402
Domain-containing proteins not elsewhere classified [BR:
zof04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121974402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
T4_Rnl1_C
DUF7623
DUF4665
GP57
HalX
Motif
Other DBs
NCBI-GeneID:
121974402
NCBI-ProteinID:
XP_042381376
LinkDB
All DBs
Position
4B:2443718..2449610
Genome browser
AA seq
406 aa
AA seq
DB search
MIPPQEIGPPKSSSQSPRSPSGAPFLSISVTDPVKLGNGVQAYISYRVITKTNLPEFQGP
EKIVIRRYSDFVWLHDKLADKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRQALDIFVNRI
ASHPELKQSEDLKTFLEEDEEAMERIRSFETGIFKKPADLLQMFKDVQTKVTDVVLGKEK
PVEETDPEYEKLKHYIFGLEDHLTETQKQAVRLVKRHRELGQSLSEFGKAIKLLGACEGD
SLGKVFAELGSKSELLSIKLQKEAHNLLMNFEEPLKDYVRCVQSIKDSFSHRANAFRLHC
ELTETTKLKEINLEKLNLMRSDKTREAEIEYRELKAESEEATRRFETIIKRMNEEIVRFQ
EQKTAEMGLAFHLFAKGQAKLANDIADAWRSVLTKIEAYSLSSGHD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattcctccgcaggagatcggtccaccgaaatcatcttcgcagagccctagatcgccg
tcgggggctccttttctctctatctccgtcaccgatcccgttaagttgggaaatggcgtc
caggcctatatctcttatcgggtcattaccaagacaaacctacctgaattccaaggccct
gaaaaaattgtgattcgccgatacagtgacttcgtgtggttgcatgataaactggccgat
aagtataaaggcatattcatcccacctcttccagagaagagtgctgtagagaaattccgc
ttcagcgctgagtttattgagatgaggcgtcaggctttagacatttttgtgaaccgaata
gcttcacaccctgaactgaagcaaagtgaagacttgaaaaccttcctggaagaagatgaa
gaggcaatggagagaataaggtcgtttgagactggaattttcaagaagcctgctgatttg
ttacaaatgttcaaggatgtacagacaaaggtaactgatgttgtcctcgggaaggaaaaa
cctgttgaagagactgatcctgagtatgagaagctaaagcactacatctttggccttgaa
gaccatctaacagagacacaaaaacaggccgttcgtcttgtaaagcggcacagagaattg
ggtcaatcattgtccgagtttgggaaggcgattaagctcttaggcgcttgtgaaggagat
tctcttgggaaggtgtttgcagagcttggttcaaaatcagaattattgtcaataaagtta
cagaaggaggcacacaaccttttaatgaattttgaagaaccattaaaagattacgtgaga
tgtgtacagtctattaaggattctttttctcatagggccaatgctttcaggttgcattgt
gaactgactgaaacaaccaagctaaaggagatcaacttagaaaaattgaaccttatgcgc
tctgacaaaactagggaggcagagatcgagtacagagagctgaaagcagagagcgaagaa
gcaacaagaaggtttgagactatcattaagcggatgaacgaagaaatagtccggtttcaa
gaacagaagactgcagaaatgggactggccttccatctatttgctaagggacaagcaaag
ctagctaacgatatagcagatgcatggcgcagcgtcctaactaagattgaagcttattct
ctttcgtcaggacacgactag
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