Zingiber officinale (ginger): 121974441
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Entry
121974441 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121974441
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121974441
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_NXF1-5
F-box_5
LRR_14
LRR_8
LRR_RPS2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121974441
NCBI-ProteinID:
XP_042381437
LinkDB
All DBs
Position
4B:2983540..2986810
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AA seq
663 aa
AA seq
DB search
MNRQPPCDCDMATVFPLDLLANILDRVPDPRDRKSCRLVCRGFLRAEELHRRSLRVLRLE
ALTGLLRRSAAGLECLDLSACPALDDRSLSAALAAGVDLLRLRSVSLSRASGVGWRGLMA
LVDACPHLEAVDLSHCVGVGDREAAALAAAAGLKELRLDKCLGLTDVGLATVAVGCAGLE
ILGIKWCLEISDIGIDLLAKKCQDLKELDISYLKITNRSINSISSLGKLEVLNMVGCSDI
DDEGLQSLKHRNNSLRSINVSRCENVTSSGLTSVIEGSNCLQKLNVGDCFPCSCGSCTSQ
ELAPLFLSKLNGLKDSLTVLKLDGFQVSASSLKIIGLNCKNLAKIGLSKCQWVTDEGICE
LVASCVHLTTIDLTCCRLLTDKALMAIGDQCKQLRCLRLESCSLITDKGLEYIGTCCSNL
EEIDLTDCSITDTAMQNLSRCSKMLVLKLGLCYMISDEGLVHIASNCRKLHELDLYRCVE
VTDDGLAAIATGCKLIQKLNLCYCTKISDRGLKQVSHLVDLRDLELRGLPHVSSSGIAKI
AIGCRRLSELDLKRCNLVNDEGLFALAQYTENLRQINISYCPVSGMGLCILLGTLKCLQD
VKLVHLSLVPIEWFEIALRASYEKLKKLKLLTGMRNLLSPLLIEKLQLRGCRIRWVDKPP
AAC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaataggcagccaccctgcgattgcgacatggcaaccgtgttccccctcgacttgctc
gccaacatcctcgaccgtgtacccgacccccgagaccgcaagtcttgccggctcgtctgc
cgcgggttcctccgcgccgaggaactccatcggcgctcgctccgcgtcctccgcctcgag
gccctcactggcctgcttcgccgctctgccgctggactcgagtgcctcgatctctctgcc
tgccccgccctcgacgaccgctccctctctgcagccctcgctgccggggtggatctgttg
cggctaagatccgtgagccttagccgcgccagtggggttgggtggcgaggcctgatggct
ctcgtggatgcgtgcccgcacctggaggctgtggacctgtcacactgcgtcggggtgggg
gatcgggaggccgccgcgcttgcggcggccgccgggttgaaggagttgcggttggataag
tgcctcgggctgacagatgtcggtctcgcgacggtggcggtggggtgcgccggactggag
atactcggaatcaagtggtgtctggagatttccgatattgggatcgatctgctcgctaag
aagtgccaggatctgaaggagttggacatctcatatctcaagattacgaatagatcgatc
aactccatttcctctcttggcaagctggaagttctgaatatggtaggatgctccgatata
gatgatgagggattacaatctctaaagcaccgaaacaactcattacggagcatcaacgtc
tctcgttgtgaaaatgtgacttctagtggcttaacctcagtgattgaaggaagcaattgt
cttcagaaactcaatgttggagattgttttccttgttcatgtggaagttgtacatcgcag
gagctggcgccactcttcctttcgaagttgaatggtttgaaggatagcttgacagtattg
aaacttgatggttttcaagtttctgcatcaagtcttaagataattggtctgaactgcaag
aacttagctaagatagggcttagcaaatgccaatgggtgactgatgaggggatctgtgag
cttgtagctagttgcgttcacttaacaactattgatctgacatgctgtcgtctgcttaca
gacaaagcccttatggctataggagatcaatgtaaacagcttcgatgcctccgattagag
tcctgcagtttaataaccgataagggtctggaatatattggaacttgttgctccaatctt
gaggagatagatctcacagactgcagtataactgatactgcgatgcagaatttgtctagg
tgttcaaagatgctagtcttgaaactaggcctttgttatatgatttccgatgaaggcctt
gttcatattgcatccaactgcagaaagcttcacgaacttgatctttaccggtgcgttgag
gttactgatgatggtttagctgccatagcaactggttgcaagttgatacaaaagttaaac
ctctgctactgcacgaagatatctgaccgaggtctgaagcaagtcagtcatttggtagac
cttcgtgatctggaactgagaggtttgcctcacgtttcaagttcaggcattgcaaaaatc
gccatcggttgtcgacgcctttctgagctggatttgaagcgctgcaatttggtaaatgat
gaaggtctatttgctcttgcccagtatactgaaaacctcagacagataaatatatcatac
tgtccagtttcaggcatgggtttgtgcatattacttggaactctgaaatgcctacaagat
gtgaagttggtacatctcagtcttgtgccaattgagtggtttgaaattgccctgagagct
tcctatgaaaagttaaagaagttgaagctcctcaccggaatgaggaacctcctttcgcca
ttgctgatcgagaaattgcaattaagagggtgccgaattcgatgggtcgataaacctccg
gccgcttgctga
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