Zingiber officinale (ginger): 121974489
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Entry
121974489 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121974489
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
121974489
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
121974489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
121974489
NCBI-ProteinID:
XP_042381510
LinkDB
All DBs
Position
4B:complement(4241558..4244614)
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AA seq
542 aa
AA seq
DB search
MEGGALWSQGMCRLQRTAGSNCLEERQISPKPEVEASRVQKLKSSMVSRPKIKLWMVRLT
TAVLLWTCVLQLMAIGEIWGPRLLKGWPSCFTPVNESSPVVVVYKAVLPPKRIYRNNGYL
MVSCNGGLNQMRAAICDMVAIARHLNVTLIVPELDKTSFWSDPRYVLTLSGFGVIAGYIC
VKHSSYYSSEFQDIFDVDHFITSLRDEVRILKELPLRLKARVDRGLVYSMPPVSWSDISY
YENQILPLIQKFKVVHLNRTDARLANNGLPPEIQRLRCKVNYASLRFTPQIEELGRRIIR
ILRQQGPFMVLHLRYEMDMLAFSGCTQGCTPEEADDLTRMRYAYPWWKEKVIDSDMKRKD
GLCPLTPEETTLVLRAFGIDSNFQIHIAAGEIFGGERRMQALSAAYPKVVKKETLLGPSY
LRYFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVLEGHRRYLGFKKTILLDRKLLVDL
IDQYTNGALSWDELSSSVKATHAERMGGPSRRVVIPDRPKEEDYFYANPQECLPQPDKPW
TS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggagctctttggtctcaagggatgtgccgcttacagagaacagccggttct
aattgcttggaggagaggcagattagtccgaagcctgaggtggaagcttcgagggtgcag
aagctgaagagctcgatggtgtcgaggcccaagatcaagctttggatggtgcgattgacg
acggcggtgttgctttggacctgcgtcctccagcttatggcaattggggagatttggggg
ccgaggctattgaaagggtggccatcctgcttcactccggttaatgaatcctctccggtg
gtcgtcgtctacaaagctgttctgccccccaaaagaatctacaggaacaatggatacttg
atggtttcatgcaatggtggacttaatcaaatgagagcagcgatctgcgacatggttgct
attgcgagacatttgaatgtaacactcatagtgccagagctagacaagacctccttctgg
agtgaccctaggtatgttttaactttgtcaggatttggggttattgcaggttatatatgt
gttaaacacagttcctattattctagtgaattccaagatatattcgatgtcgatcatttt
ataacttcattgagagatgaagttcggatattgaaggaacttcctctgaggttaaaggca
agggttgatcgaggactggtttattcgatgccgcctgttagttggtctgatatttcgtat
tacgaaaatcagattcttcctttgatacaaaagttcaaggttgtccatttgaatagaacc
gatgcccggcttgctaataatggtcttccgccagaaatacagagattgcgctgcaaagtg
aactatgcctcacttagattcacccctcaaattgaagaattgggcagacggataattaga
attctgcggcagcaaggtccttttatggttctgcatttgcggtatgaaatggatatgttg
gcattctctgggtgcacccaaggttgtactcctgaggaagcagatgacttgactagaatg
agatatgcatatccctggtggaaagagaaggtcatcgactctgatatgaaaaggaaagat
ggtctctgccctctaacaccggaagagaccactttggtactgagagcgttcggtatcgat
agcaattttcaaatacatatcgcagctggagaaatatttggcggagaaaggagaatgcag
gctctttccgcggcttatcctaaagtggtaaaaaaggaaactctattgggaccttcgtat
cttcgatactttcagaatcactcatcccaaatggccgcgttagattacttagtttcttta
gagagcgatatctttgttcctacatatgatggtaacatggctaaagttcttgaaggtcat
cgcaggtatctcgggttcaagaagacaattctattggacaggaagctgctggtcgatctg
atagatcagtacaccaatggcgccttgagttgggatgaattatcttcgtcagtgaaggca
actcatgctgaacgcatgggtggccctagccggagagtggtgattcccgacaggcctaag
gaagaggactacttctatgcaaatccccaagagtgtctcccacagcctgataaaccatgg
acttcgtga
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