KEGG   Zingiber officinale (ginger): 121974533
Entry
121974533         CDS       T08725                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03020  RNA polymerase
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121974533
  09124 Replication and repair
   03420 Nucleotide excision repair
    121974533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    121974533
   03400 DNA repair and recombination proteins [BR:zof03400]
    121974533
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121974533
  RNA polymerase III system
   RNA polymerase III
     121974533
  RNA polymerase I system
   RNA polymerase I
     121974533
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121974533
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG DTP-pb9_B-dom Big_8
Other DBs
NCBI-GeneID: 121974533
NCBI-ProteinID: XP_042381579
LinkDB
Position
4B:complement(5008688..5013269)
AA seq 146 aa
MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL
SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL
MMLKGDPSNAAQFELDQRVFLLIRKV
NT seq 441 nt   +upstreamnt  +downstreamnt
atggttgagcttctctttgaagacatctttactttgacaaaaatagacccagatggtaaa
aagtttgataaagtttctcggatagaagcacgcagtgagcagtttgatatgttcatgcat
ctagatgtgaacactgaaatttatccactccatgttggagataagttcacaatggttcta
tctccaacactcaatctggatggaactcccgacactggttacttcttgcagggtaacaga
aaatcacttgccgacaaatttgagtatgtgatgcacgggaagctatacaaaatctcagag
gaagcttcaggcggacagaatattaaagtagaaatatatgcatcgttcggaggactgctt
atgatgctcaagggcgacccctccaatgccgctcaattcgagttggatcagagagtcttt
cttctgataagaaaagtgtaa

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