Zingiber officinale (ginger): 121974691
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Entry
121974691 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121974691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121974691
03036 Chromosome and associated proteins [BR:
zof03036
]
121974691
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121974691
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121974691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
121974691
NCBI-ProteinID:
XP_042381791
LinkDB
All DBs
Position
4B:10481130..10500369
Genome browser
AA seq
1048 aa
AA seq
DB search
MLRDSHCIISDSNLVRSGQNEAVGGDCSSLMFSKYKKRRMLYNGDVGSLLPTLYSSDYFT
KPSIDELAALEMIDSGYCSRVPDFTIGRVGYGQIKFIGSTDVRWLHLDQIVKFDRNSVVV
YTDEADKPPVGQGLNKAAEVTLTLKLRSLDAHSPELDRFGGILRKRADRQGAFFVSFDLS
SGNWTFLVHHFSRFGLDDEEEEDIVMIDNDIDSTAEVKEFPAHSAGTVLSHSLPAHLGLD
PVRMQELRALMFSAEEEYEDLNGSFQKINSYNKEQLKEDSPVINGKILANKTTLHGSSRK
GRIQISSSPIRRPSQALLEYNLNNTDLSPSRDIFLSGQRKGLPLTRLTKVEGFRLEEKHQ
TPLSGGYSKNIVDAALFMGRSFRVGWGPNGILVHSGTPVGSPSCGLSSQVNIQKVAMDKT
VRDKNNKINEGLVDLHFSSLMNLHKSVEHETSQLVHDSFKLKLLRVECSRLTLPEICQAY
IETIEKAHDISELSTSNRVFLMHQVSIWALIRILFSERETNEQSNDDDREGMMLDTKDDS
LDMDVEAKPFARRAEFSFWLQESVCHRVQDEITYLNDSSDLEQILVLLTGRQLDTAVELA
AARGDVRLAILLSQAGGSVVSRSDMAQQLDIWRMNGMDFKFIENDRLKLYELLAGNIQDA
FQVSSIDWKRFLGLIMWYQLPPDTPLSVVFHTYQQLLCEKRAPHPVPVYIDEGPLEEEEV
DWNIGDNHDLAYYVMLLHANEDKNFNQLKTMFSAFSSTYDPLDYHMIWHQRAILEAIGTF
SSKDLSILDMSFVDQLLCLGLCHWAIYVVLHMPYCDNAPYIQAKLIKQILCQNCEIWSSQ
EIQYQFIEELGVPSEWMHEALAIYFEYQGDLSEALEHFLRCSNWKKAHSIFITSVAHRLF
LSSQDEEIWRITSFMEEHKSEIADWDLGAGIYFDFYILRSSLKEGDIMSEADPLGKKNDE
CRSFFTRLSESLLIWGSRLPADARLTYAKMSEELCNLLMSIPGLSSTAMVRMSCFDTMLI
APTPEDMRSSHLQSAVSDFTYFLSEIST
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgattctcactgcatcataagcgactccaatcttgtcagaagtggtcaaaat
gaagcagttggtggtgattgcagcagtttgatgttttctaagtataagaaaagaagaatg
ttatacaacggggatgtaggctccttgctacctactttgtactcctcagactattttacc
aagccctcaattgacgagttggcagcactagagatgattgactcaggttactgcagccga
gttcctgatttcactattggaagagtgggttatggtcaaattaaattcataggaagcact
gatgtcagatggttacatttggaccagattgtaaaatttgacaggaattcagtggtggta
tatactgatgaggctgacaaacccccagtaggtcaaggccttaacaaagctgctgaagta
actttgaccctgaaactgagatcattagatgctcattctccggaattagatagattcggt
ggtatactaaggaaacgagctgatagacaaggagccttctttgtctcatttgatttgtca
agtggcaattggacattcctagtgcatcatttcagtagatttggattggatgatgaagaa
gaagaggatattgtcatgattgacaacgatattgattcaactgcagaggtaaaagaattt
cctgcacattctgctgggactgtgttatctcattcacttccggctcatctgggtcttgat
cctgtaagaatgcaagaattgagggcattgatgttttctgctgaggaggagtatgaagat
cttaatggatcattccaaaaaattaatagttacaacaaggaacagttaaaggaggattcc
ccagttatcaatggcaaaatattggctaataaaacaacattacatggttcttccaggaag
ggaaggattcaaattagttcttcacccattcgaagaccctctcaagccctactggagtac
aatctaaataacactgacttgagcccatcaagggacatttttctgagtggtcaaaggaag
gggttgccactaactaggctgacaaaggtagaggggtttagactggaggagaagcaccaa
actcccttatctggaggatactctaagaatatagtagatgctgctttgttcatgggtaga
tcatttcgagttggatggggaccgaatggcatacttgttcatagtggtactccagtaggc
agtccaagctgtggattatcttctcaagtaaatatacaaaaggttgccatggacaaaact
gtgagagataagaacaataaaatcaatgaggggcttgttgatttgcatttttcttctttg
atgaatctccacaagtcggtagaacatgaaacttcccaattggtgcatgattctttcaaa
ttaaagcttctgcgagttgaatgcagtcgtttgactcttcctgaaatttgccaggcttat
attgagactattgagaaggcacatgatatttctgagttatctacatctaaccgtgtgttc
ttgatgcaccaagtatctatttgggcattgataagaattctattttcagagagggaaaca
aatgaacagtcaaatgatgatgatagggaaggaatgatgctcgatacgaaggatgactct
cttgacatggacgttgaggcaaaacctttcgctcggagagcagaattttctttttggctg
caagagagtgtttgccatcgagttcaggatgagataacctacttaaatgattctagtgat
ttggagcagatacttgtacttttaactggacggcagttggatacagcagttgagcttgct
gctgcaagaggagatgtccgactagctattttactaagtcaggctggtgggtcagtggtc
agtcgttctgacatggcacaacagttggatatctggagaatgaatggcatggattttaag
tttattgagaatgataggttaaagttgtatgagttacttgcaggtaatatacaagacgca
ttccaggtttcatccattgactggaaaaggtttctagggttgataatgtggtatcaactt
cctcctgataccccattgtctgtggtatttcatacttatcagcagcttctctgtgaaaaa
agagctcctcatcctgtcccagtttacattgatgaaggacctcttgaagaagaagaagtg
gactggaacattggtgataatcatgaccttgcatattatgtaatgcttcttcatgctaat
gaagacaagaacttcaaccaactgaaaaccatgtttagtgcattctcttccacatatgat
ccacttgactaccacatgatctggcaccagcgtgccatattggaagctattggtacattt
agttcaaaagatcttagtatacttgacatgagttttgttgaccagttgctatgtcttggg
ttgtgccattgggcaatttatgtcgttctgcacatgccttactgcgataatgcaccatat
atccaggctaagcttattaaacagattctgtgtcaaaattgtgaaatttggagctctcaa
gagattcaatatcagtttattgaagaacttggtgtaccatcagaatggatgcatgaggct
ctggcaatatacttcgagtatcagggagatttgtcagaggccctggaacattttcttaga
tgctctaattggaaaaaagctcactcaatcttcattacatcagtggctcatcgcttattc
ctatcatctcaagatgaagagatttggagaatcacaagtttcatggaagaacataagtct
gaaattgctgactgggacctgggtgctggaatttattttgatttctacattctaaggagt
tcattgaaagagggggacatcatgagtgaagcggatcctcttggaaagaaaaatgatgaa
tgcagaagcttttttactcgtttaagtgaatctctattgatttggggaagcagattgcct
gctgatgcaaggttaacctacgcaaagatgtcagaagaactgtgtaatctactgatgtcc
attcctggtttgagctccacagcgatggttcggatgagctgctttgacacaatgctcatt
gctcccactccggaagatatgcgatccagtcatctgcagagcgcggtttcagacttcact
tattttctatcagagatctcaacatga
DBGET
integrated database retrieval system
