KEGG   Zingiber officinale (ginger): 121974718
Entry
121974718         CDS       T08725                                 
Name
(RefSeq) lysine-specific demethylase 5B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zof01009]
    121974718
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zof03036]
    121974718
Enzymes [BR:zof01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121974718
Protein phosphatases and associated proteins [BR:zof01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121974718
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121974718
SSDB
Motif
Pfam: PLU-1 JmjC PHD zf-C5HC2 JmjN ARID PHD_5 KDM5_C-hel PHD-1st_NSD PHDvar_NSD
Other DBs
NCBI-GeneID: 121974718
NCBI-ProteinID: XP_042381828
LinkDB
Position
4B:complement(11827875..11870665)
AA seq 1866 aa
MGKGRPRAVEKGALGHAPGGGATASSVSTSSSGVVEAPVFYPTEEEFVDPLAFIYKIRPQ
AEPFGICRIVPPRSWNPPFALDRSAFTFPTKSQDIHLLQARPPSCDPDTFRLEYGRFLES
HLGKRSTRRVVFEGEDLDLCRLFNAVKRYGGYDKVCAGKLWADVARFIRPASKISECAKH
VLCQIYREHLYDFEEYNRRLNRGIRKNRSSKPSMMRKTLAQQEAPGRKRRKRGVGCDRLK
EVVKKEELDQICEQCKSGLHGEVMLLCDRCDKGWHLYCLSPPLQSIPPGNWYCLECVNSD
KDSFGFVPGKLYTVDAFRLIDDRMKRKWFGQTIVSRVQMEKQFWEIVEGRGGELEVMYGN
DLDTSLYGSGFPRPNDPIPSSVDPSIWNQYISSPWNLNNLPKLPGSMLRSVRENIAGVMV
PWLYIGMLFSSFCWHVEDHCFYSINYLHWGEPKCWYGVPGNKANAFEEVMRKALPDLFEA
QPDLLFQLVTMLNPSILLENGVQVYGVLQEPGNFVITFPRSFHGGFNFGLNCAEAVNFAP
ADWLPHGGIGSELYRLYHKAAVLSHEELLCVAIKNGCDAKAFSYLKEEMQRVFDREKKCR
EELWVNGIVRSLQMHPKKHPHYVGTEEDPTCVICRQYLYLSAVSCSCRPSTIVCLEHWEH
LCECKPNKLRLLYRHTLAELGDLIDMVSPNSKLSNVDEILPLSDGFSQGCRSYNGRSSAM
TKKVKGCEISYLQLAKDWFSQSCHILESPFSDSTYNSSLTEAEQFLWADHDMDPVRDMTF
KLIEAQRWARNLNSCLFKVESSEQSPHNHYEKVTLSELENLLSFQILPCCLPDFHKLKAV
VGDAETLVTEIQHALSSSSTIGTLQMLYSKATNFPVSLQIVERLSLEISSAKNWLKNAHL
CLKEKRPDVINIDILNKIKLEMLELHVNFPEMDMLSRLCDEVESWRIRCKDMLRGYIRMK
ELKDFLVSTDHLTVSIPELDLLRKYSSDARSWVCHLQGVLQNLDKREDYGNIVIELSCIL
KSGYLLHVQVDELPLVVAELKRSKCRKNASKALSTPMPLGFLQRVLYEASKLKIENEQLF
VNVSKMLTEAIAWEEGAKAALEHVAHISVFEKILTDSDAILVGLPSLPNIRDAVSMAKMW
ISRSLLFLKQTPNANTSQPLLRVDDLKDLVAQTKHLKVTMVATDKLQSIVAEVEGWEQDS
CCLLENVKSLFDTCHSSSTIDNHLSTKIEELLRKIESSIEVGDHLCYNFKDLPNLKVAAV
SLRWCLTAISFCYRIPLLKDVDRLLDEANHLPVIFLDSHLVQLLNVGVNWLRKALCTLPE
LNSTKRCKLKDVELVLDEIQEVIVPYPMMVTQIQNAIRKHESWVGQVHAYFALPKGQPWP
SLLKLKKHGEAAAFMCSELDKVASEVGKVENWLSQCHAILEPVFGNLGSLTSRLVQIKDS
LDRALRIYHDSKGQGARGFCVCCPNYGGNEEVYTCLICNDQYHFSCVGPPLANASMTNEY
ACPLCVYVENGALPRNESQLLFSKGNRPEVKSFFELVSAASDIFARIEELNLVERIVERA
CECKSFLSEIVKSITSHYENDLSSISENILIALKAITVTGIHDPQGCCNLESVLTRYSWK
VRVRKLLAGSKKPVLSQLQRVMKEGTAMGITSEDHLMKEITDMKQISLQWVDIAKKVASD
SGKLALSEVYKLIIQGEDLPLHFEKELKLLRERTLLYCICRMPNDQRAMIACDQCDEWYH
FECVNLHEPPPKTFYCPACQPTNGVAVSLPYVICSEERSNNEAGPNTPACHRESKHIGSR
INYGHSQDAVELLDVLRSHNGIDQLWRENRRPFHRTTRRRAFPIYFVGMQLEREEAQKGR
ERGTIG
NT seq 5601 nt   +upstreamnt  +downstreamnt
atggggaaagggcgaccacgcgccgtcgagaagggtgccctagggcacgcccccggcggc
ggcgccaccgcctcctccgtctccacctcttcttccggcgtcgtcgaggcacctgtcttc
taccccaccgaggaggaattcgtcgaccccttggccttcatctacaaaatccggccccag
gccgaacccttcggcatctgtcgtatcgtccctcctcggtcctggaatcccccgttcgcg
ctcgaccgctccgccttcaccttccccaccaagtcgcaggacatccatctcctccaagct
cggcctccttcttgcgaccccgacacattccgcctcgagtacggacgcttcctcgagtcc
cacctcggcaaacggtcaacccgtcgggtcgtattcgagggcgaggatctcgatctctgc
cgtctttttaatgccgttaagcgctatggtggctatgataaggtctgcgcgggtaagctc
tgggctgacgtcgcacgcttcattcgtccggcatctaagatttccgagtgcgctaagcac
gtcctctgtcagatctatcgtgaacacctgtacgacttcgaggaatacaacaggcgattg
aatcggggaattaggaagaacaggagttctaagccgtccatgatgcggaagactttagcc
cagcaggaggcccctggtcggaagagaagaaagagaggtgtgggttgtgatagattgaag
gaggtagtcaaaaaagaggaattggatcagatctgtgagcaatgcaagagtggtttgcat
ggcgaagtcatgcttctatgtgatcggtgtgataaaggctggcatttgtactgtttgtcc
ccgcctctacaaagcattcccccgggtaattggtactgcttggagtgtgtaaattctgat
aaggacagctttggttttgttcctgggaagctgtacacagtcgatgctttcagactgata
gatgatcgaatgaagaggaagtggtttgggcagacaattgtcagtcgtgttcagatggaa
aaacaattttgggagatcgttgaaggtagaggaggggaattagaggtcatgtatggcaat
gatttggatacttcactatatgggagtggatttcctcgaccaaatgaccccattccatca
tcagtagatccaagtatctggaaccaatatatatccagcccatggaacctcaataaccta
ccaaagttgccaggttctatgcttcgctctgtccgtgagaatattgctggcgttatggtt
ccttggctctacattgggatgcttttttcatccttttgttggcatgttgaagatcattgt
ttttactcaattaattaccttcattggggagaaccaaagtgttggtatggtgtacctggt
aataaagcaaatgcttttgaagaggtaatgcgtaaagctcttccagatctctttgaggct
caaccagatttacttttccagcttgtcacgatgcttaatccctccatcttgctagaaaat
ggtgtgcaagtttatggtgttttgcaggagcctggaaactttgtcattactttcccgaga
tcttttcatggcggtttcaattttggtttaaattgtgctgaggctgtcaattttgctcct
gctgattggctgcctcatggtggcattggatcagaattatatcggttgtatcacaaggct
gctgttttatcccatgaagaacttctttgtgttgccatcaagaatggttgcgatgccaaa
gctttttcctatctgaaggaagaaatgcagagggtatttgatagagaaaagaaatgtagg
gaggaactatgggtcaatggcattgtcaggtcattgcagatgcatccaaagaaacatccc
cattatgtgggtactgaggaggaccctacttgcgttatttgtcgacagtatttgtatcta
tcggctgtttcatgcagctgtaggccatctaccattgtctgtctggagcactgggaacat
ctttgtgaatgcaaacccaacaaacttcgtctcctttatcgtcatactcttgcggagctt
ggtgacttgattgatatggtgtctcctaactctaaactctcaaatgtggatgagatctta
ccgttatcggatggtttttctcaaggatgtagatcttataatggcagatcaagtgccatg
acgaagaaggtgaaaggctgtgaaatttcctatttacaacttgctaaagattggttttct
caatcctgccatattttggagagtccattttcagattccacttataatagttctctaact
gaagctgaacaatttctttgggctgatcatgacatggatcctgtgcgtgatatgacattt
aagctaattgaggctcaaagatgggcacgtaatttaaatagttgtctgtttaaagtagag
agctcggaacaatctccacataatcattatgagaaagtaacattatctgagttagagaat
ctgctaagctttcaaatcctgccttgctgcctgcctgatttccataaattgaaggcagtt
gtaggggatgcagagactctagttactgaaatacaacacgccctttcatcttcctcaact
attggcacattacaaatgctatactctaaggccaccaattttccagttagtctccaaatt
gttgagagattatcccttgaaatttcatctgcaaagaattggttgaaaaatgctcatttg
tgcctcaaggagaaaaggcctgatgttatcaatattgatatcctaaacaagataaagttg
gagatgttagagcttcatgttaactttccagaaatggatatgctttcaagattgtgtgat
gaggttgaatcatggagaatcagatgtaaagatatgttgagaggttacattagaatgaag
gaactcaaagatttccttgtgtctactgatcatctgacggtcagcattccagaattggat
ctgctaaggaaatacagctctgatgctcgatcttgggtttgccatctccaaggtgttctg
caaaatcttgataagcgagaggactatggaaacattgttatagaactttcatgcattttg
aagtctggctacttgttgcatgtgcaagttgatgagttgcctcttgttgttgctgagcta
aaaaggtccaagtgtagaaaaaatgcttcaaaggcactttctactcctatgcctttaggt
ttccttcagcgtgttttatatgaagcttctaagttaaaaattgagaatgaacaactgttt
gtgaatgtttctaagatgctcacggaagccattgcttgggaagaaggagctaaagctgcc
cttgaacatgtagcacacatctctgtgtttgaaaagattttaacggattctgatgcaata
ttagttggtcttccatctcttccgaacatcagagatgcagtgtcaatggctaagatgtgg
ataagtagatctctactatttttaaaacaaactccaaatgcgaatacatcacaacctttg
cttagagttgatgatttgaaggatttggttgctcaaactaaacatttgaaagtcactatg
gttgctactgacaaacttcagagtattgttgcagaagttgaaggatgggagcaagatagt
tgttgtttattagaaaatgtcaaatccctgtttgacacatgccattctagttcaactatt
gacaatcacctttcgacaaagatcgaggaactactcagaaaaattgaatcttccatagaa
gttggggaccacttgtgttataattttaaggacttacctaatctgaaagttgcagctgtg
tctttgcgatggtgcttgacagcaatctctttctgctataggattccattgctaaaggat
gttgatagattacttgatgaagcaaaccatcttcctgtaatcttcttggatagccatctt
gtgcaactgttgaatgtgggagttaactggcttaggaaggcactttgcacactcccagaa
cttaacagcactaaaaggtgcaagttgaaggatgttgaacttgttttagatgaaattcag
gaagttattgttccatatccaatgatggttactcagattcaaaatgccatccgaaagcat
gagtcctgggtgggccaagttcatgcttattttgcacttccaaaaggacagccatggcct
tcattattgaagctgaaaaagcatggtgaagctgctgcttttatgtgttctgagcttgat
aaagtagcttctgaagtaggaaaagttgagaattggttgtcccagtgccatgctattttg
gagccagtatttggtaacttgggctccttaacttccaggctagtgcaaatcaaagattca
cttgatagggctttgcgtatatatcatgattcaaagggacaaggagccagagggttctgt
gtctgctgccccaattatggagggaatgaagaagtctatacttgcctcatatgcaatgat
cagtaccatttttcatgtgttggaccaccacttgctaatgcttctatgacaaacgagtat
gcatgtccgttgtgtgtttatgttgaaaatggagctctaccaagaaatgagagccaattg
ttgttttccaaaggaaatcgacctgaagtcaaatcgttttttgaattggtttcagctgct
tcagatatatttgctaggattgaagaattgaatttggtggaaagaattgtcgaacgggca
tgcgagtgcaagtcctttttgtctgaaatagtgaaatctattacttctcactatgaaaac
gatctcagctctatctctgagaatattctgattgctctgaaggcaataactgtgactggg
atacatgatccccaaggttgctgcaatcttgagtcagtattgacaagatattcttggaaa
gtaagagtccggaagcttttagcaggatcaaagaaacctgtcctttcacaacttcagagg
gttatgaaagagggtacagctatgggcataacatctgaggatcacctcatgaaggaaatt
acagatatgaaacagataagcctgcagtgggtagatattgccaaaaaggtggcttcggat
tcagggaaacttgcacttagtgaggtctacaagcttataattcaaggtgaagatttgcca
cttcattttgaaaaggaattgaagttattgcgagaaagaactttgctttattgcatctgt
cggatgcctaatgatcagagagcaatgattgcatgtgaccaatgtgatgagtggtaccat
tttgaatgcgttaacttgcatgaacctcctcctaagaccttttactgtcctgcatgtcaa
ccaactaatggagtagctgtatctcttccgtatgtgatatgcagtgaagagagatcaaac
aatgaagcgggccctaacacacctgcctgtcatagggaatctaaacatataggttcaaga
attaattatggacactcacaggatgcggttgagttacttgatgttttaagatctcataat
ggtattgatcagctatggagagaaaatagaaggcctttccacagaaccactaggagacgt
gccttccctatttacttcgtaggaatgcaattggagagggaggaggcacaaaagggaagg
gaacgtggaacaataggatga

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