Zingiber officinale (ginger): 121974768
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Entry
121974768 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121974768
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121974768
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121974768
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121974768
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121974768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
121974768
NCBI-ProteinID:
XP_042381922
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All DBs
Position
4B:13950909..13964613
Genome browser
AA seq
901 aa
AA seq
DB search
MRLYIDLGFSGAALLLVLLVGPVVAFLVHQKWRLAEARQAEVRRLALLAAQEAAVAEMEA
MASYSATSAAGVYSTYVAKEPSALPECAVCSVFAAARCSRCKIVRYCSGKCQIIHWRRGH
KDECQPPPVSEKYNREDELGLEGVQSEQSGLAEKMLEPKEGTEEVERFSQRSAASISSYS
MDNLNGVHNEGISSKDVSVKTIISDSFSAPSIIPANLAFSHTINSPNDAWYDGKSLPNIA
GAGESSSFTSSLGSVADTGNGATIMSSTPELARSNSLANNSMFSDHSREIPSTSKVEADD
LVPSGTSDLKATSSLDHASNEVCVRVGNGFHPSTYSISENYSHESSSSEAISNLESNGTL
VSNKKISRYVANGQSTEVKPINPKTTRSSAATLDHYSTNGVTRSFSLYESSSNGNAHRTS
SKVSRHYYSELMLFPYDLFIKFYNSDKVNLQPCGLTNCGNSCYANAVLQCLVFTRPLTAY
LLEGFHSRICSKQEWCFTCELENLVRNAKEGKSPLSPIGILSHLQNIGSKFGHGQQEDAH
EFLRYAIEVMQSICLKEAVAKPDGLLAEETTLIQQTFGGYLQSKLRCARCKGKSEHCERM
MDLTVEIGGDISTLDEALLRFTSSETLDGENKYKCDRCNSYERAKKKLTILEAPNVLTIV
LKRFQSDNFCKINKAIQFPEYLDLARYMSGDDKSPVYRLYAIIVHLNVTNTSSSGHYICY
VKDRQGMWYEIDDSKVKPVDIEKVLSKGAYMLLYSRCLPRAPSSVRKARAHEFVQQARKI
TRDSKGKPGGSLVSDYGEYLYPYRSDLYGHQNDSASDNSSLFDESSTCSTVSTKESTTTE
DLWEHMSGESDCVSPSSPMRISENYDGFTRSRHSSKADVTMPVTDPGQNTSSSGRKLIRW
W
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctctacatcgatctaggtttttcgggagcggcgctgcttctggtcctcctcgtc
gggcccgttgttgcgttcctagtgcaccagaaatggcgtctggcggaggcgaggcaggcg
gaggtccggcggttggcgctgctcgcagcgcaggaggccgccgtcgcggagatggaagcc
atggcatcctactcggccacatcagctgctggtgtttattctacttacgttgctaaggag
ccctcggcgctgccggaatgtgctgtgtgctctgttttcgccgcggcgagatgttcccgt
tgcaagattgtcagatattgctctggtaagtgtcagattattcattggaggcgaggtcac
aaggacgaatgccaacctccacctgttagtgagaagtataatagggaagatgaattgggt
cttgaaggagttcaatctgaacagtctggtttagcggagaagatgctagaacccaaagag
ggtactgaagaagttgagaggttttctcagcggtctgctgcatctatatcctcttattct
atggataatcttaatggggtccacaatgaaggtattagttctaaggatgtttctgtgaag
acaatcatttctgattcattctctgctccatcaataatacccgctaatttggcattttct
cataccattaattctcctaatgatgcctggtatgatggcaaatcacttccaaatattgct
ggggcaggagaatcttcatcttttactagtagccttggaagtgtagctgacactggcaat
ggagctactataatgtcttcaactcctgaacttgctaggtcaaattctttggctaataac
agtatgttctcggatcattcaagggagattccatctacatctaaagtagaggcggatgat
ttggttcctagtggcacatctgacttaaaagcgacttcatcacttgatcatgcaagcaat
gaagtatgtgtgagggttggtaacgggtttcatccaagtacatactcgatatctgaaaat
tattctcatgaatcctcatcatcagaagctatatctaacttggaaagtaatgggactcta
gtttcaaacaagaaaatctcaagatatgttgctaatggacaaagcactgaagtaaagccc
ataaatcccaaaaccaccagatcctctgcagctactttagatcactattctactaatgga
gttactcggtctttttcactctatgaatcatcctcaaatggcaatgctcatagaacatct
tctaaagtttcaaggcactactattcggagttgatgctttttccatatgaccttttcatc
aaattctacaactctgacaaggttaatttgcagccctgtggtcttactaattgcggaaat
agctgctatgctaatgcagttctccagtgtttggtatttactcggccattgactgcatat
cttctcgaaggttttcattctagaatatgttcaaagcaggaatggtgttttacatgcgaa
cttgaaaaccttgtgaggaatgcaaaggaagggaagtctcctttatctccaattggaatt
ctgtctcatttgcagaacattggaagtaagtttggtcatggacagcaggaagatgcccat
gaattcttaaggtatgctattgaagtcatgcagtctatttgcttaaaggaagctgtagca
aaaccagatggattattggcagaggagacaacactaatacaacaaacttttggtggctat
ctgcaatccaaattacgatgtgctagatgcaagggcaagtctgaacattgtgaacggatg
atggatctcactgttgagataggtggcgatatttcaactcttgatgaagcactacttcgt
tttacatcgtcagaaactttggatggggaaaacaaatataagtgtgacagatgcaactcc
tatgagcgagcaaaaaagaaattgacaatattggaggctcctaatgtcctcaccattgtg
ttgaaaagatttcagtctgataatttttgcaagatcaacaaagctatccagtttcctgaa
tatctcgatttagcacgttatatgagtggcgatgacaaatcccctgtttatcggctttat
gcgataattgttcacttgaatgtcactaacacttcctcttctggtcactacatctgctat
gtgaaggatagacaaggcatgtggtatgagattgatgatagcaaggtaaagcctgtggac
attgagaaggttttgtcaaaaggtgcatatatgcttctttattccaggtgtttgcctcgt
gctccaagttctgtgaggaaagcgagggctcatgagtttgtacaacaagcaaggaagatc
acaagggacagtaaaggaaagcctggtggctcattagtttctgactatggggaatactta
tatccatatcgatcagatctctatggtcaccagaatgattctgccagtgacaattcttca
ctcttcgatgaaagctccacttgcagtacagtgagcacaaaggagtcgacgaccacagaa
gacttgtgggagcacatgtctggcgaatcagactgtgtcagccccagtagccccatgaga
atctctgagaattatgatggatttactcgctctcggcattcctccaaagcagatgtcacg
atgccagtgacagatcctggacaaaatactagttcctcaggaaggaaattgatcagatgg
tggtag
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