Zingiber officinale (ginger): 121974776
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Entry
121974776 CDS
T08725
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121974776
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
COG5_N
Motif
Other DBs
NCBI-GeneID:
121974776
NCBI-ProteinID:
XP_042381937
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Position
1B:116097009..116101114
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AA seq
699 aa
AA seq
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MHDSGGSCSSNQSISIVWFRRDLRVEDNPALAAGVRAGAVVAVYIWAPEEEGPFYPGRVS
RWWLSQSLHHLDSSLRRLGTSLLTKRSLDTASTLLEVVQSTAASNLFFNHLYDPLSLVRD
HQMKELLTSQGVTVHSFNADLLYEPWEVNDENGQPFTTFVPFWNRCLSMHYDPATPLLPP
KRIIPGDTSRCPSDILIFEDESEKGSNALLARAWSPGWRNADKSLTAFVNGPLIEYSANR
RKADSASTSLLSPHLHFGELSVRKVFQLVRMKQLVWANEGNKSGEESCDLFLKSLGLREY
SRYLCFNHPYSHERPLLAHLRFFPWVIDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHD
RIRVVVASFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNP
QLEGYRCDPNGEYVRRWLPELARLPTQWIHHPWDAPEPVLQAAGVELGSNYPLPIVEMDA
AKARLQDAVAEMWQLEAASRAALENGTEEGLGDSSELPQIDRSLEVDMEVEHEQLTNNIS
GRRHQDQMVPSLTSSLVRVEEEEASVASVRASDSRAEVPSPTDYELQSHREATGQAARHT
DADAVAFRGADVTQQLSPVRLDHAEHSAAQSSGSLRESGVVPVWSPPPTSSCSGLFVNDD
AGITNSGYLDRHLHSRRRMNWGQLPQTTTRSWEMDNTIG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacagtggcggcagctgtagcagcaaccaaagtattagtattgtatggttcagg
cgagatttgagggtggaggacaacccagctttggcggcaggggtgagggcaggggctgtg
gtggctgtctacatctgggcgccggaggaggaggggcctttctaccccgggagagtctcc
aggtggtggctcagccagtccctccaccacctcgactcctccctcaggcggctgggcact
tccctcctcaccaagaggtctctggacactgcctccaccctccttgaggtcgtccagtcc
actgctgcttccaatctcttcttcaaccacctctatgatccactctcgcttgttagggac
catcagatgaaagaacttctgacttctcaaggcgtaacagttcattccttcaatgctgat
ttgctatatgaaccatgggaagtcaatgatgaaaatggtcagccattcaccacttttgtg
cccttctggaacagatgccttagcatgcactacgatccagctacacctttgttgcccccc
aaaagaattataccaggagatacatcaagatgcccttcagacatcctgatcttcgaggat
gagtctgagaagggtagcaatgctctccttgctcgagcctggtcgccagggtggcgtaat
gccgataagtctttgactgccttcgtcaacggacctttgatcgaatactctgcaaacaga
aggaaagcagatagtgcctctacttcattgctttcgcctcatttgcattttggagaactg
agcgttcgcaaagtttttcagcttgttcgaatgaagcaactcgtatgggccaacgaaggg
aacaaatcaggcgaagagagctgcgatttgtttctcaagtctctgggtctccgtgagtac
tctcgatacttgtgcttcaaccatccctacagccacgagaggcctcttttggcgcacctc
agattctttccatgggtgatcgacgaaggttacttcaaagcgtggaggcaaggcaggact
ggttatcctctcgtagacgccggaatgagggagctatgggccactggctggttacacgat
aggattcgtgtggtggtagcgagcttcttcgtgaaggtcttgcagcttccttggagatgg
ggcatgaagtacttttgggacaccctcttagatgctgatctcgaaagcgatgctctgggt
tggcagtacatctccgggactcttcctgatggtcgcgagttggacagaattgataatcct
cagttagaaggctacagatgcgatccgaatggagaatatgtaaggcgctggcttcccgag
ctcgccaggctaccaacacagtggatacaccatccctgggatgctcccgaaccagttctc
caagctgcaggagtggaacttggatccaactaccctctccccattgttgaaatggatgca
gccaaagccagactgcaagacgccgtcgccgagatgtggcaactagaagccgcatcaaga
gctgcgctcgagaatggcactgaggaaggccttggggactcgtcggaactgcctcagatc
gatcgttctctcgaagtggatatggaagtcgaacacgaacaattgacgaacaacatttcg
ggcaggaggcatcaggatcagatggtgcctagcttgacctcttctctagttcgagtcgag
gaggaagaagcttctgttgcttcagtccgcgcttccgacagcagagccgaagtgccatcg
ccaacagactatgagttgcaatctcatagagaagctactggtcaagctgcaaggcacaca
gatgcagatgcagtcgcattcagaggagcagatgtaactcaacagttgagtccagttcgg
cttgatcatgctgaacattccgcagcgcagtcatccgggagtttgagggaaagcggcgtc
gtccctgtttggtctccacctccgacttcgagctgttcagggctgtttgttaacgatgac
gcaggaatcaccaacagtggctatttggacaggcatctgcattctcgtcgacggatgaac
tgggggcaacttccgcaaacaacgacaaggagttgggagatggataacacgatcggctag
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