Zingiber officinale (ginger): 121974859
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Entry
121974859 CDS
T08725
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121974859
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
121974859
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121974859
Prokaryotic type
121974859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
121974859
NCBI-ProteinID:
XP_042382054
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Position
4B:23184656..23188980
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AA seq
498 aa
AA seq
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MAPAVVAPSSAPAAAVHPARVRFLRPGSPSSSPSGPVVYWMFRDQRAADNWALLHAADLA
SRSAVPLCVAFCLSRRFLGAHARQLGFMLRALRPLSRRLAALGLPFFLLRGDAPDVLPDL
FRRLGASTLVADFSPLRPVRDWKDALCERLPAEVAFHEVDAHNVVPIWVASDKLEYSAKT
IRSKIHRLLPEFLVEFPKLPVPAVPWAGEAPPEIEWDELINEVIEETGEVPEINWCEPGE
EAATEMLMGSKDGFLTKRLKSYDSDRNDPVKPRALSGLSPYLHFGHISAQRCALEARKLR
NSCPKSVDAFLEELIVRRELADNFCYYQPHYDSLQGAWEWARKSLMGHAKDKREHVYSRE
QLEKAQTADPLWNASQLEMVHCGKMHGYMRMYWAKKILEWTNRPEEALSIAIYLNDKYEL
DGRDPNGYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVEGYIAYVNKLVSGT
KKRKSDSLTSLVTKHLKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgcagtcgtcgcacccagctccgcaccggccgccgcggtccacccggcccgc
gtccgtttcctcaggcccggctccccgtcctcctccccttccggccccgtcgtctactgg
atgtttcgcgaccagcgagccgccgacaactgggccctcctccacgccgctgatctcgcc
tcgcgctccgccgtccccctctgcgtcgccttctgcctctcccgccgttttctcggcgcc
cacgcccgccagctcggcttcatgctccgcgctctccgccctctgtctcgccgcctcgca
gccctaggactccccttcttcctcctccgcggtgacgcccccgatgtcctccctgatctc
ttccgccgcctcggagcctccaccctcgtcgccgatttctcacccctgcgccccgtccgc
gattggaaggacgctctctgcgagcgcctcccagctgaagttgccttccacgaggtcgat
gcccacaacgtggtccctatctgggtcgcctccgacaagctcgaatacagcgccaagacg
atacgctccaagatccatcgtctcctcccggagtttctcgtcgagttccccaagcttccg
gtccccgccgtgccgtgggcaggggaggcaccgcctgaaatcgaatgggatgaactgatc
aacgaagtcattgaggaaacaggggaagtgccggagatcaactggtgtgagccgggggag
gaagctgcgacagagatgctgatgggaagcaaagacggcttcttgacaaagaggttgaag
agttacgacagcgatcgtaatgatccagtgaagccgagggcgttgtcggggctctcgcct
tacctgcactttggccatatctcggctcagcggtgtgctcttgaagctcggaagcttcgg
aattcctgtcccaagtcggtggatgcattcttggaggaattgattgtgagaagggagttg
gctgataatttttgttattaccaacctcattatgattcgttgcaaggtgcatgggagtgg
gctcgcaagtccttgatgggccatgctaaagataaacgagagcatgtttattcgagagaa
cagctagagaaagcacaaactgctgatcctctatggaatgcctcgcaacttgagatggtt
cattgtggtaagatgcatggatacatgaggatgtactgggccaagaaaatcctcgaatgg
acaaacagaccagaggaagcattgtcaatagcaatatacttaaatgacaagtatgagttg
gacgggagagatccaaatggctatgtcggttgcatgtggtctatatgtggcgtccatgat
cagggctggaaagagaggccggtctttggaaagattcgctacatgaattatgcaggttgc
aaaagaaaatttaacgttgaaggatacatagcctatgtgaataagctggtcagtggaact
aagaagaggaaatcggatagtttaacaagtcttgtaacaaaacatttgaaatcatag
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