Zingiber officinale (ginger): 121974923
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Entry
121974923 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121974923
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121974923
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121974923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-RING_2
zf-C3HC4_2
Prok-RING_4
zf-RING_5
zf-C3HC4
Sina_RING
Ferritin-like
zf-RING_UBOX
BBP2_2
Motif
Other DBs
NCBI-GeneID:
121974923
NCBI-ProteinID:
XP_042382146
LinkDB
All DBs
Position
4B:32302116..32345655
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AA seq
380 aa
AA seq
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MKPHKHLHQTHYHSESSKDYKSHGMQQANFIPDNFNSLDQVISALRESGLESSNLILGID
FTKSNEWTGKHSFNRRSLHAIGDRPTPYEQAISIIGHTLSPFDEDNLIPCYGFGDASTRD
HSVFSFYPDNHPCCGFEEVLSRYRKIVSHLNLSGPTSFAPIIRTSIDVVKRSNWQYHVLV
IIADGQVTRNPDVPPGKLSSQEDATIKAIVDASYFPLSIIMVGVGDGPWDAMEHFDDCIP
ERKFDNFQFVNFTSIMSGNKDMPKKEAAFALSALMEIPFQYRATQGLQPLESQKIQISSP
RVLPPPKGAIECDSIAMPSSHQALPTGDTVSVEQVCPICLTNPRDMAFGCGHMTCKECGA
TLATCPMCRAPIATRLRLFA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcacaagcacttgcaccaaactcattatcattctgagagttccaaggactac
aaaagtcatggcatgcagcaggccaatttcattccagataatttcaactcgcttgatcag
gtcatttctgctttgagggaatctggtcttgagtcatcaaatttaatcctcggaattgac
ttcacaaaaagcaatgagtggacaggaaaacattcatttaatagaagatctcttcatgct
attggtgacagacctaccccatatgagcaagcaatttccataattggccatacattgtcc
ccttttgatgaggacaatttgataccatgttatggttttggagatgcatctacgcgtgac
cattctgtgttcagcttttacccagacaatcatccttgttgtggttttgaggaagttctt
tcacgatacagaaagattgtttcccacctaaacctttcaggccctacatcatttgcccca
attatccgcacatcaattgatgttgtcaaaagaagtaattggcagtatcatgttcttgtc
atcattgctgatggacaagtcacaaggaatcctgacgttccaccaggaaaattaagttca
caagaagatgcaaccataaaagcaattgttgatgccagttactttcctctatctataatt
atggttggtgttggtgatggaccatgggatgcaatggaacattttgatgactgtattcct
gaacgtaaatttgacaattttcagtttgtcaacttcacaagcattatgagtggaaataaa
gacatgccaaagaaagaagcagcctttgcactctctgcgttgatggagattccttttcaa
tatagagccacacaagggctccaacctctggaatcccagaaaatccaaataagttcacca
agagttcttcctcctcctaagggtgcaattgaatgtgatagtatagcaatgccatctagt
catcaggcacttccaacaggagacactgtttcagtagagcaggtctgccctatatgctta
acaaacccaagggatatggcatttggttgtggacatatgacatgcaaggaatgtggtgcc
accttagcaacatgtcccatgtgtcgggcacctattgctacgcgcttgagactcttcgct
taa
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