Zingiber officinale (ginger): 121975063
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Entry
121975063 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121975063
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121975063
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121975063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121975063
NCBI-ProteinID:
XP_042382365
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Position
1B:117464816..117469598
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AA seq
599 aa
AA seq
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MADDEDYLSSSDLEDCYLTDQEDVIEENVLQGLEDGREEECHWSLSSVITKESLLAAQKE
DLRKVMELLALKEQHARTLLIHYRWDVERIFELLDQKGRDRLFSQAGVTVVNNKGLSTSV
NPVTCNVCFETVPTDSITEMDCGHTFCNDCWTEHFIVKINDGQSRRIRCMAPKCSAVCDE
ASIRNLVSARCPDIADRFDRFLLESYIEDNNKVKWCPSVPHCGNAIRVEGDICSEVECTC
GIQFCFSCLSEAHSPCSCLMWDLWIKKCQDESETVNWITVNTKPCPKCHKPVEKNGGCNL
VACICGQAFCWLCGGATGRDHTWSNITGHSCGRFKEDQTKNTERARRDLYRYMHYHNRYK
AHTDSLKQESNLKETIQGKISISENKQSKIKDYSWVMNGLNRLFRSRRVLSYSYPFAFYM
FGDELFKDEMTAEDRDLKQNLFEDQQQQLESNVEKLSMFLEKDFPSCSDDEVMDTMRHII
NLSNVVDRLCKQMYQCIENDLLYPLQRATHNIAPYKSKGLQRASELLVLWGSDQSSDMKT
IHDAQTDSTPNGTAAICKFRGSTSSDESGWASHKRPRKDAHGGPPLFDLNMPPEVIDKI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgaggactacctttcgtcgagtgatttggaagattgctacctcactgat
caggaagacgttatcgaagagaacgtcctacagggcctcgaagacgggcgtgaggaagag
tgccactggtcactgtcgtcggtcatcacaaaagagtccctcctagcagcacagaaagag
gatttgcggaaggtgatggagctgctggctcttaaagagcagcatgcgaggacccttctt
attcattaccgctgggatgttgagaggatctttgagttgctcgatcaaaagggaagggac
agattgttctcacaagcaggagtaaccgttgtcaataacaaaggcttatccacttcagtg
aatccagtcacctgtaatgtatgttttgagaccgttcctacagattcaatcactgaaatg
gactgtgggcatactttctgcaatgattgttggactgagcattttatagtgaagataaat
gatggacaaagccgtcgcattagatgcatggcacccaaatgcagtgctgtatgtgatgag
gcaagcataaggaatttggtcagtgcaaggtgtccagatattgctgatcgttttgatagg
ttcctgcttgaatcatacattgaagacaataataaggttaaatggtgccctagtgttcca
cattgtggaaatgccatacgtgttgagggtgatatttgttctgaggttgaatgtacatgt
ggtatacagttctgtttcagttgtttgtcagaagcgcattcaccttgttcatgcttgatg
tgggatctatggatcaagaaatgccaggatgaatcagaaactgttaattggataacagtg
aacacaaagccttgtccaaagtgtcacaaacctgttgaaaagaatggtggttgcaatctt
gttgcatgtatctgtgggcaagcattttgttggctgtgtggtggggctacgggaagagat
catacgtggtctaatatcactggtcacagttgtggtcgcttcaaagaagaccaaacaaag
aatactgagcgtgcaaggcgtgacttataccgttatatgcactatcataataggtacaag
gctcatacagattctctcaagcaggaaagcaatctcaaggaaaccattcaggggaagatt
tccatttcagagaacaagcaatctaaaattaaagactacagttgggtgatgaacggactg
aataggctctttagatcaagacgggtcctttcatattcgtatccatttgcattctacatg
tttggagatgagctctttaaggatgagatgacagcagaggatcgagacctgaaacagaat
ttgttcgaggaccagcaacaacagctagaatccaatgttgagaagctatctatgttcttg
gagaaggattttccaagttgttctgatgatgaggtcatggacactatgcggcacatcata
aatctttctaatgttgtcgacagactttgcaaacaaatgtaccagtgcattgagaatgac
ttgttgtatccccttcagcgagcaactcacaacattgctccatataaatcaaaaggcctc
cagagggcttcggaactattggtgttgtggggctccgatcagagctctgatatgaaaacc
attcatgatgcacaaacagattcaactcccaatggaactgctgccatatgcaaattccgt
gggtccacgagttcagatgaaagtgggtgggcttctcataaacgacctagaaaagatgct
catggcggtcctcctctgtttgatctgaacatgcctcctgaggtgattgacaaaatctga
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