Zingiber officinale (ginger): 121975102
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Entry
121975102 CDS
T08725
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121975102
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
121975102
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
121975102
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
121975102
2.5.1.29 geranylgeranyl diphosphate synthase
121975102
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
121975102
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
121975102
NCBI-ProteinID:
XP_042382445
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Position
4B:64700442..64717821
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AA seq
380 aa
AA seq
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MPSTIIIIHPHRLQFAMAFSASLFYPSPNLSSTKMPPYPLLFRRPRSVSLPVRCSSAAAS
SSFDLRTYWTTLISQIEEALDAAVPVRYPESIHKAIRHVVLSPGAKRAPPIMCIASCELV
GGLRSAAFPAACALEMVHAASLVHDDLPCMDSSPLRRGQPSAHALFGVDMAILAGDALFP
LAYQHIVTHTPSPDPVPLSVIPLVLTEIARAVGSTGMAAGQFLDLSGAAAGSEKEILQVL
EKKFGEMAECSAVCGGLLGGASDQELEALRRYGRAVGVLYQLVDDVLMESNGGTGKMRSN
ASIVKAVGMDRSLELVEEVRANAKKELDKFKDKYGEKVLPLYSFVDYAIERGFVVEGRGL
EASSAAGGSDGSSETFSKGD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaccatcataatcattcatcctcatcgtctccaatttgcgatggccttctcc
gcctctctcttttatccctctcccaatctctcctctaccaaaatgcccccgtatcccctc
cttttccgcagaccccgttccgtctctctccctgtccgctgctcctccgccgctgcttcc
tcctccttcgatctacgcacctactggaccaccctgatctcccagatcgaagaggcgctc
gacgccgccgttcccgtccgatacccggagagcatccacaaggcgattcgccacgtcgtt
ctctcccccggagccaagcgcgcgccgcccatcatgtgcatcgcgtcctgcgagctcgtc
ggcggcctccgctctgctgcttttcctgcagcctgcgcactcgagatggtccacgccgcc
tccctcgtccatgatgacctaccctgcatggactcctccccgctccgacgcggccagccc
tccgcccacgctctgttcggggtcgacatggctatcctcgccggcgatgcactgtttccc
ctcgcctaccagcatatcgttacccataccccctcgcccgaccccgtcccactgtccgtc
atccctctcgttctcacggagatcgcgcgcgccgtcgggtccaccggaatggctgctggc
caatttctcgacttgtcaggcgccgccgctggaagtgagaaggagattctccaggtgctg
gagaagaaattcggagagatggccgagtgctcggcggtatgcggggggctgctgggcggc
gctagcgaccaggagctcgaagcactccggcgttatggtcgagcggttggggttctctac
cagctggtggacgacgtgctgatggagtccaacggcggcacagggaagatgaggagcaac
gcgagcatcgtcaaggcggttggaatggaccgctcattagagttggtggaagaagttagg
gcgaatgccaagaaggagctggataagttcaaggacaaatatggagagaaggtgctacct
ttatatagttttgtggattacgccatcgagaggggcttcgtggttgaaggtagaggcctc
gaagcctcttcagctgcaggtggtagtgacggaagcagtgaaacattttcaaagggagac
tga
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