Zingiber officinale (ginger): 121975159
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Entry
121975159 CDS
T08725
Name
(RefSeq) autophagy-related protein 3-like
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121975159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121975159
04121 Ubiquitin system [BR:
zof04121
]
121975159
03029 Mitochondrial biogenesis [BR:
zof03029
]
121975159
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121975159
Ubiquitin system [BR:
zof04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
121975159
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121975159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
121975159
NCBI-ProteinID:
XP_042382543
LinkDB
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Position
4B:74740546..74747913
Genome browser
AA seq
317 aa
AA seq
DB search
MVLSQKLHEAFKGTVERITGPRTVSALKEKGVLSVSEFVVAGDNLVAKCPTWSWEAGEPS
KRKTYLPADKQYLITRNVPCLRRASSVEEEYDAAGGEFLLGDDDDDDNDGWLATHGMPKG
TRSADEEVLPSMESLDIRKDVAIKSIPSYFGGEEEEDIPDMADYEDSENLIEADPATLQS
KYLVATEPEDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRAPLQPELVFEDVSQDHA
RKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLISRGVEPEVDKYLFLFLKFIASVVP
TIEYDYTMDFDLGSSSH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggtgctatcgcaaaagctacacgaggccttcaaggggacggtggagcggatcacgggg
ccgcgtactgtctcagccttaaaggagaagggcgttctcagcgtatccgaattcgtcgtc
gctggcgacaatctcgttgcgaaatgccctacctggtcttgggaggctggcgagccgagc
aaaaggaagacatacctgcctgcagacaagcagtatctcataacgagaaacgtgccttgt
ctacggagggctagttcggtggaagaagaatatgatgctgctggaggagagtttcttctt
ggtgatgatgatgatgatgataatgatggttggttggcaactcatgggatgccaaaaggg
accaggagtgctgatgaagaagttttaccttccatggaatctctagacatccgaaaagat
gtggctatcaagtctatcccctcttattttggtggtgaagaggaggaagacatacctgat
atggctgattacgaggattcagaaaaccttatagaggcagatcctgccaccctccagtca
aagtatttggttgcaactgaaccagaggatgataacattcttcggacccgaacatatgat
attagtatcacgtatgacaaatattaccaaactcctcgcgtatggctaacaggatatgat
gagtcaagggcccctttgcagccagaactagtatttgaagatgttagccaggatcatgca
cggaaaacagtaacaattgaagatcatcctcacttgccagggaagcatgcatctgtacat
ccatgtcgtcatggcgcagtgatgaaaaagatcattgatgtcctcatatcacgtggagtt
gaaccagaagttgataagtacctcttcttgtttctgaagttcattgcctctgtggttcct
actattgaatacgactacaccatggactttgatcttggcagctccagtcattga
DBGET
integrated database retrieval system