Zingiber officinale (ginger): 121975181
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Entry
121975181 CDS
T08725
Name
(RefSeq) peroxisome biogenesis factor 10-like
KO
K13346
peroxin-10
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121975181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121975181
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
121975181
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
Prok-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
121975181
NCBI-ProteinID:
XP_042382578
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Position
4B:complement(75992984..76002283)
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AA seq
391 aa
AA seq
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MGGERSGGGEAGPSFRPATEGLRERRFPPAAQPEIMRAAEKDDNYAAYVHDACRDAFRHL
FGTRVAVAYQSEIKLLGQTLYYVLTTGSGQQTLGEEYCDICQVASSYGLPPTPARRMLFV
IYQTAIPYLAERISSRMTARGIILAELNSNEFFGNNNPTQAYGFDVPRSSSLTSTHASIL
SKLRQNIHGLWLWVLQKWPLVLPLAHEILQLALRTNLMFFYFEGLYYHVSKRASGIRYVF
IGKPSNQRPGYQILGVFLLIQLCILGAEGLRRSNLSSITSSVHHPSPRTHGSFSGRDLPV
LNEDGNLIPDIDASKGSSITDSFSHSEPQSSGGISKCTLCLGSRQHPTATPCGHVFCWNC
IMEWCNEKLECPLCRTSITHSSLVCLYHSDF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggagaggagcggcggcggagaggccggcccgagcttccggccggcgacggaa
gggttgcgggaaaggcggttccctccagcggcgcagccggagatcatgcgcgctgccgag
aaggacgacaactacgccgcgtacgtccatgatgcctgccgggacgccttccgacatctc
ttcggcacgagggttgctgttgcatatcaaagcgagataaagctattagggcagacactt
tactacgtattgacaactggttctggacagcagactttgggagaagaatactgtgatatt
tgccaggttgcaagttcttatggtttgcctcctacaccagctagaaggatgctttttgta
atctaccagactgcaattccttatcttgcagaaagaatcagctcaaggatgactgctcgt
ggtattattttggcagaattgaactcgaatgagttttttgggaacaacaatccaacccaa
gcttatggttttgatgtgcccaggagttcttctttaacaagtacacatgcatccatttta
tcaaagttgagacaaaatatccatggcctatggttatgggtgcttcagaaatggccgctg
gtgcttcctcttgcccatgagattttacagttggctcttcgaaccaacctaatgttcttt
tattttgaaggtttgtattatcatgtgtcaaaacgagcatcaggtatccgctatgtattt
attgggaagccatcaaaccaaaggcccgggtatcaaattttgggtgtattccttctaatc
cagttatgcattcttggagctgaaggactacggagaagtaatttatcttcaataacaagt
tcagttcatcatccatcaccaagaacccatggatcattttcaggtagagatttacctgtt
ctgaatgaagatggcaatctgatccctgatattgatgctagtaaaggaagttctatcact
gattccttttctcattcagagcctcaatcatcaggtggcataagtaaatgcaccctttgc
ctcggttcacgccaacatcctacagcgacaccctgtggtcatgtcttctgctggaattgc
ataatggaatggtgcaatgaaaagcttgaatgccctctctgtcgcacttcgattactcac
tcaagcttagtttgcttgtatcattctgacttttaa
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