Zingiber officinale (ginger): 121975186
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Entry
121975186 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121975186
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
121975186
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
121975186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
121975186
NCBI-ProteinID:
XP_042382585
LinkDB
All DBs
Position
4B:76231057..76246583
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AA seq
503 aa
AA seq
DB search
MTGGVVAVEACGLPQVRTAVPARARRQAWFVTACGCVLLWTCLIQLLTYGRVWRGWNPAR
LFLVIRDSVPAVESSFAPPPLVAPSPVLRSSNYTSNGYLKLSCNGGLNQMRAAICDMVMV
ARLLNLTLVVPELDKNSFWADPSNFDDIFDVRHFITSLKDEVHIIKKLPKSISRNTSSHF
LMMRPVSWSDERYYLQKILPLFNKFNVIQFNKTDARLANNLAFELQKLRCRVNYHSLKFT
PQIMTLGNKLLHILRGKGSFVALHLRYEMDMLAFSGCTHGCSEKEVEELKSLRYAYPWWR
EKEIDSVAKRLQGLCPLTPEETTLILKALGFDKDTVIYIASGEIYGGEERLSVLRAEFPN
LVKKETLLHPKDLHQFQNHSSQMAALDYMVSLESDIFIPTYNGNMAKLVEGHRSRYLDFR
KTMLLNRRKLVELLDMHNNKTLPWDDFASSVKRVVDESLGQPTCRKVLTDKPKEEDYFYA
NPQECLPNAKECLKVLGNSSSAR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactgggggcgtcgtcgcagtcgaggcctgcgggctgcctcaggtgagaacggcggtg
ccggcgcgggcgcggcggcaggcgtggttcgtgacggcgtgcggttgcgtgctactctgg
acgtgcctgatccagctccttacctatggccgtgtctggcggggttggaatcccgcgcgg
ttattccttgtcatcagggacagcgtccctgcggttgaatcgagtttcgctcctccgccg
ctcgtggctccgtctccagtgctacggtcgagcaattatacaagcaacggttatctgaaa
ctatcatgcaatggaggcttgaaccaaatgcgtgcagcgatatgtgacatggtgatggtg
gctcgcttactaaacctaacattagtggtcccggaactggacaagaattcattctgggct
gacccaagtaattttgatgatatctttgatgtgaggcatttcatcacatcattgaaagat
gaagtgcacataattaaaaagctaccgaagagcattagtagaaatacttcaagccatttt
cttatgatgcgtcctgtgagttggtcagatgagagatactacttacaaaagattttgcca
ctgttcaacaagttcaatgtgattcagtttaataaaacagatgcacgattggcaaacaat
ctagcttttgagctccagaagcttagatgccgtgtaaactatcattcactgaaatttact
cctcagatcatgacattaggaaacaagttgcttcatattcttcgagggaagggatccttt
gttgccttacatttgagatatgaaatggacatgctggctttctctggttgcactcatggt
tgttctgagaaagaagttgaagagcttaaaagtttaaggtatgcctatccatggtggaga
gaaaaagagatcgattccgtggccaagagactgcaaggtttgtgcccacttacacccgag
gagaccacccttatcctcaaagcattgggatttgacaaggatactgtaatatatattgcc
tccggtgagatttacggtggggaagagaggctatcggtattgcgtgcagaatttcccaac
cttgttaaaaaggaaacgttgcttcatccaaaagatctgcatcagtttcagaatcactca
tcccaaatggctgcactcgattatatggtttctttggagagtgacattttcatcccaaca
tacaatgggaacatggctaaactcgtcgagggacatcggagcaggtaccttgattttcgg
aaaaccatgttgctgaaccgcaggaaattggtcgagctcctcgatatgcataacaacaag
acacttccatgggatgactttgcatcttctgttaagcgcgttgttgatgagagccttgga
caaccgacctgtcgaaaagttcttaccgacaagcccaaggaggaagactacttctatgcc
aacccgcaagagtgcctacccaatgccaaagagtgccttaaggtattgggaaattcaagc
tcggcgagatga
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