Zingiber officinale (ginger): 121975221
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Entry
121975221 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121975221
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121975221
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
DUF7885
F-box_5
LRR_At5g56370
LRR_14
F-box-like
LRR_4
LRR_RPS2
F-box
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
121975221
NCBI-ProteinID:
XP_042382660
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Position
4B:78556459..78595185
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AA seq
470 aa
AA seq
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MGLLVEDFPKELLVDIVKRIERTADRNSISLVCKRLYEIDREQRDFLKVGSGLHPATEAL
TALCLRFANIKKLEITYFGWMSNSGKQLDNQGLFVLCSNCPLLTELTLSFCSFINDSGLA
YLSSCPKLRSLKLNFAQSISSNGILSLVVGCKNLSALHLIRCMRVTSVEWLAYLGQFGKL
QDLSIKYCKGISEDDMIKLGPGWNNLRQFEFEMDAYYRHPKVYDNSLIEKWANHLSCENL
RELILVNCILPRSRGLCCLLWRCEALIRLNLDMCIGVKDSDMIALSQKSRNLRSISIRIP
SRYFVSSYQTSSLRLSDESLTALSIGCLMLEVFELSFSDGEFPSLSCLTQSGILTLIQSC
PIRILVLDSTCFFNDIGMEALSTAPYLQTLKLVKCQEVTDEGMQLIACFPCLTTLSLCKC
LGITDDGFKLLIGLHKLDLLMVEDCPQISEDGVQRAARVVSYKQDLSWLY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgttggtggaagattttccaaaagaattgcttgtcgatattgttaagagaata
gaaagaactgccgacagaaattcaatttctctagtatgcaagcgtctatatgaaattgat
cgagaacaaagggatttcttaaaggtcggatcgggattacaccctgcaacagaagcacta
actgccctctgcttgcgctttgctaatataaagaaactagaaattacctactttggctgg
atgtctaactcgggcaaacaattagataaccagggcctttttgtgctgtgttccaattgc
cctttgcttacagaactcactttaagtttttgttcatttattaatgatagtggccttgca
tacctatcctcttgcccaaagcttagatccctcaagctaaattttgctcaatcaatcagt
tctaatggtattctctcacttgttgttggttgtaagaatctttctgctcttcatctcatt
cgctgcatgagagtgaccagtgttgagtggcttgcttatcttggtcagtttggaaagctt
caggatctttcaataaaatattgcaagggtattagtgaggacgatatgataaaacttggt
cctggatggaataatcttaggcaattcgagttcgagatggatgcatattacaggcaccca
aaagtttatgataattcattgatagaaaaatgggcaaatcatctgagctgtgaaaacttg
cgagagcttatcttggtgaattgcattttgcctcgaagcagagggctttgttgtttgcta
tggagatgtgaagcactcattaggcttaacttggatatgtgcattggggtcaaggacagt
gatatgattgcattatctcagaagtcaaggaacctaagaagtatctcaattcgtatccct
tcacggtatttcgtgtctagttaccaaaccagttcactgagattgtctgatgagtcattg
acagcactgagtattggatgtctgatgttagaagtgttcgaactatccttttctgacgga
gaattcccatccttatcttgcttgacacagagtggtatccttacattaatccaaagttgt
ccaatccgaattttagtactcgactctacttgcttctttaatgacattgggatggaagcc
ctttctactgccccctacttgcagacactgaagctagttaaatgccaagaagttacagat
gagggaatgcaacttattgcatgctttccttgcttaactactctttcactctgcaaatgt
ttaggcattacggatgatggatttaagctgctaattgggttacacaagttggatcttctg
atggtagaggactgccctcagatttctgaggatggtgtacaaagggctgccagggttgtt
tcttacaagcaggatttgtcttggctttactaa
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