Zingiber officinale (ginger): 121975250
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Entry
121975250 CDS
T08725
Name
(RefSeq) transcription factor MYB3R-5-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121975250
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121975250
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121975250
NCBI-ProteinID:
XP_042382731
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Position
4B:complement(80220347..80251682)
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AA seq
617 aa
AA seq
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MKVEHSCVENRQLAGASSSSLSDGSCGLLRVSPAISSPLKTSASRRIPSSRRTSGPIRRA
KGGWTLHEDETLRKAVEAYKGRCWKKIAEFFPDRTEVQCLHRWQKVLNPELIKGPWTTEE
DEKITSLVEKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMLKKDAWTEEEELILMNTH
HAHGNKWAEIAKVLPGRTDNSIKNHWHSSLKKKLDFFLATGKLPPGPVNGSNDMRNLDSG
QSLHYPNEGSDINARAFSESASSMDIDLPAGQGGLEDQKCRSDSSMVEPKMEVINNFIVR
TNYDHAVEFNAPTQSTVEPKKEAINNSILRRIHDPTAEFTTNTLTPDVCTRSDPGTELAE
CSNTSEKDQNVKSKLEVLVNINVRGIHDPSVHCTKDIPTSDVCTRSDPENEVKDCRNTDE
ELNCASELMHQETPLLGSLYYTPPQIEDVCLSENYAIITTSMNVRQSCSSSVMTSPEVYI
TPSSVMGKSPVQDVHSILKDAARSFPNTPSIFRRVRKKTETSPDSDTSTSGVKSVKLLDS
HASSSEGKNIHNLETIVNSNSRSSPYDKGDLSCNRKNFDVSPPYRFRSKRSTTIKSVEKQ
LDFSENDSNGKTPLPHM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggaacatagttgtgtggagaacaggcaattggcaggcgcctcgagctcgtcc
ctctcggatggaagttgcggcttgttgagggtttcgcctgctatttctagcccactgaag
acttctgcgtcacggagaattccttcatccaggaggactagtggccctataaggcgagca
aagggtggctggacattacatgaggatgagacattgaggaaagctgttgaagcttacaaa
ggaagatgttggaagaaaatagctgaattttttcctgatagaactgaggtccaatgtctt
catcggtggcaaaaggttctcaatcctgaactcattaaaggcccatggaccactgaggaa
gatgagaagattaccagtcttgtagagaagtatggacccacaaaatggtccgtgattgca
aagtctcttccaggtcgtattggtaaacaatgtcgagagaggtggcataatcatctaaat
cctatgctaaagaaagatgcttggactgaagaggaggagcttattctcatgaacacacat
catgcgcacggaaataaatgggcagaaattgccaaggtcttacctggaaggactgataac
tcaataaagaatcactggcatagttcgttaaagaaaaagttagatttctttttggctact
ggcaagcttccacctggtcctgtgaatggttcaaacgacatgagaaaccttgatagtggg
caatcacttcactatccaaatgagggttcagatataaatgccagagccttttctgaatca
gctagttctatggatattgatctgcctgctggacaaggtgggttggaggaccaaaaatgc
aggtcagactcgtcaatggttgagcctaagatggaagttataaacaattttattgtgaga
acaaattatgatcatgctgttgaattcaatgctcctacacaatcaacagttgagcctaag
aaggaagctataaacaactcaattttgcgaagaattcatgatcctactgcagagttcacc
acaaacactctcacacctgatgtctgcactagatctgatccagggacagagttggcagaa
tgtagtaacacttctgagaaggatcaaaatgtcaagtctaagctagaagttttagtcaat
ataaatgtaagaggaattcatgatccttctgtacattgcactaaagatataccaacctct
gatgtttgcactagatctgatccagaaaatgaggtcaaagattgtagaaacactgatgag
gaactaaattgtgcatctgaactgatgcaccaggaaactcctttgctcggttctctctat
tatacaccacctcagattgaagatgtttgtctttctgaaaattatgcaatcataaccaca
tctatgaatgtgcggcaatcatgtagctcatctgttatgacatcacctgaagtttacatt
acaccttcctcggtaatgggaaaaagtccggttcaagatgttcactccatcttaaaagat
gcagctagaagtttcccaaacactccgtctatattccgtagagtgagaaagaagaccgaa
acatctcctgattctgatactagtacttcaggagttaagagcgtgaaacttttggacagc
catgcttcttctagtgaaggaaaaaatatacataatttggagacaattgtcaattcaaat
tccagatcgagtccttatgacaaaggagacttatcatgcaataggaagaactttgatgtt
tctcccccatacaggttcaggtccaaaagatcgacaactatcaaatctgtggagaagcag
cttgatttctcagaaaatgattcaaatggtaaaacccctttacctcatatgtga
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