Zingiber officinale (ginger): 121975261
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Entry
121975261 CDS
T08725
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121975261
03036 Chromosome and associated proteins [BR:
zof03036
]
121975261
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121975261
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121975261
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121975261
microRNA pathway
RISC loading complex
121975261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
E1_UFD
Motif
Other DBs
NCBI-GeneID:
121975261
NCBI-ProteinID:
XP_042382741
LinkDB
All DBs
Position
4B:81137963..81148044
Genome browser
AA seq
957 aa
AA seq
DB search
MLDAVERERPFFLHSPSLFAAVATMPTRQVSSQLKAEKHILSKKPVQSSMKQHKADVVPP
KEPKSAYRRRRRGRGKPTDPRQAKLDQEAANESVSPPVSSKGIAFCRRPGFGQEGTRCIV
KANHFLTELPDKDLTQYDVIITPEVSSRSTNRAIIAEMVRLYRETELGMRLPAYDGRKSL
YTAGSLPFHSKEFAVNLVEDDEGTGLSRVKEYRVSIKFAARADLHHLRQFIAGRQTDAPR
EALQVLDIVLRELSNQRYISVGRCFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLN
IDMSSTAFIDPLPVIEFLAQILGKDVSSRPLSDADRIKIKKALRGVKVEVTHRGNVRRKY
RVSGLTSQPTRELIFPVDDQMTMKSVVEYFKEMYGFTIQYAHLPCLQVGNQKKANYLPME
ACKIVEGQRYTKRLNEKQITSLLKVTCQRPREQEMDILQTVRQNAYGNDPYAKEFGINIS
DKLTSVEARVLPAPWLKYHETGKEKECLPQVGQWNMMNKKVINGCKVSHWACINFSRSVQ
ENTAHSFCQELAQMCQVSGMEFNREPVIPIHSARPEQVEKALRHVYNAATNKLKGKELEL
LVAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNT
VLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQ
AHRQELIQDLYKTWHDPQRGIVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQV
LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFTNNHKDRSSTDKSGNILPGTVVD
SKICHPAEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSV
SIVPPAYYAHLAAFRARFYMDPEVAESPPQSMHQTNGSSVKPLPALKDKVKRVMFYC
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgctagatgctgtagagagagaaaggcctttcttcctccattcgccgtcgctgttcgcc
gcagtcgccaccatgcccactcgtcaggtgtctagccaactgaaggccgagaagcacatc
ctctccaagaagcccgttcagagcagcatgaagcaacacaaggctgacgtcgtcccgcca
aaggagcccaagagcgcctatcgccgacgaaggagagggagagggaagccgacggacccc
cggcaagcaaagctcgatcaggaagctgcaaatgagagcgtttctcctcctgtttcgagc
aaaggtatcgcattttgccgacgtccggggtttgggcaggagggcacccggtgcattgtc
aaggccaaccatttcctcactgagttgcccgataaggacttgactcagtacgatgtgata
atcacgccggaagtgagctcgcggagcacaaatagggctatcattgcagaaatggtacgg
ttgtatagggagactgagttgggcatgagacttcctgcttatgatggaaggaaaagtctt
tacacagctgggagtttgcctttccactccaaggagttcgcagtaaatcttgtggaggat
gacgagggaacgggattgtctagagtgaaggagtatagagttagcatcaagtttgctgct
cgagctgaccttcaccatttgagacaattcatcgctgggcggcagactgatgctcctaga
gaagcccttcaagttctcgatattgttttaagggaattatcaaatcaaagatacatatcg
gttggaagatgcttttactcaccagatatcagaaagccacaacgcctgggcgacggttta
cagtcatggtgtggcttctaccaaagcattagaccaacacagatgggactttcactgaat
attgatatgtcatccaccgctttcatcgatcctcttcctgtgatcgagtttttagctcag
atcctaggcaaagatgtatcatctaggccattgtcagatgctgatcggataaagatcaag
aaagctctgagaggggttaaagtagaggtcacacacagaggaaatgtgcgacggaaatat
cgagtttctggcttgacatcacaacctacaagggaactcatttttccagttgatgatcag
atgactatgaaatctgtggttgaatatttcaaagagatgtatgggtttacaattcagtat
gctcatcttccttgccttcaagtaggaaatcagaagaaagcaaattatctaccaatggag
gcttgcaaaatagtagagggtcagagatacacaaagaggttgaatgaaaagcaaattact
tccttgctaaaagttacatgccagagacccagagaacaagaaatggatattttacagaca
gttcgccaaaatgcttatgggaatgatccctatgcaaaggaatttggaataaacataagt
gacaagctaacctcagtggaggcccgagtacttcctgctccatggctaaagtaccatgaa
actggcaaagaaaaggagtgtctacctcaagttggtcagtggaacatgatgaataagaaa
gtgatcaatggatgtaaagtaagtcattgggcttgtattaacttttctcgaagtgttcaa
gagaacacagctcatagtttctgtcaggagctagcacaaatgtgccaagtctctggaatg
gaattcaatcgagaaccagttatcccaattcactctgctagacctgaacaagtggagaag
gccctaagacatgtatataatgcagcaacaaacaaactaaaaggcaaagaacttgagctt
cttgtagccatccttcctgataataacggttctttatacggtgatcttaaacgaatatgt
gaaactgatttggggttgatctcacaatgctgcctaacaaagcacgtgttcaagataagc
aaacaatatcttgcgaatgtctcactcaaaattaatgtcaagatgggaggaagaaatacc
gtgctcctagatgctataagttggagaattccattagtgagtgatattccgacgattata
tttggagcagatgtaacacaccctgagacaggagaagattctagtccatcgattgctgct
gttgttgcctctcaagactggcccgaagtcacaaaatatgctggcttagtatgtgctcag
gctcatcgacaggaactgattcaggatctttacaagacatggcatgatcctcaacgtggc
atcgttacgggaggcatgattagggaacttctcatatcttttcgcaaggcaacagggcaa
aaaccattaaggattattttttacagggacggtgttagtgaaggacagttctatcaagtg
ttgctatacgaactagatgctattcgcaaggcatgtgcatccttggaaccaaattaccag
cctccagtgacgtttgtggtggttcagaaacgccatcatacgaggctatttacgaacaac
cacaaggacagaagcagcacagacaagagtggaaacatcctaccaggtactgtggttgat
tccaagatctgccatcctgctgagtttgacttctacctatgcagtcatgctggaatacag
ggtactagtcgaccagcccattaccacgttctatgggacgagaacaatttctcagcagat
gaaatgcagactcttacaaacaatctctgctacacgtatgctcggtgcacccggtctgta
tctatcgtgccgcctgcctattacgcccacctagctgcttttcgagctcggttttacatg
gatccagaggtagctgaaagtccaccgcaaagtatgcaccagacgaacggatcctctgtg
aaacccctacctgccttgaaagacaaggtgaagagggtaatgttctactgttga
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