Zingiber officinale (ginger): 121975519
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Entry
121975519 CDS
T08725
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor REI1 homolog 2-like
KO
K14816
pre-60S factor REI1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121975519
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121975519
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
C2H2-zf_KIN17
zf-met
DUF629
TFIIA
Motif
Other DBs
NCBI-GeneID:
121975519
NCBI-ProteinID:
XP_042383156
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Position
4B:complement(91998317..92002381)
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AA seq
411 aa
AA seq
DB search
MPALTCNACNKEFDDEVQQKLHYRSEWHRYNLKRKVAGVPGVTEELFQARQFALAEENSK
LSATPMLYGCALCGKDYRSSKAHAQHLKSRAHAMKTLENVGPSATVITTVKPYAARTLNK
TTRMAQVIGENEDDDESEDEWEEVNPNDMAVASESLSFLHVEDGKVADDDEQDDAIDEEL
DTSCCFICDQKYESIESCMVHMHKQHGFFIPDIEYLEDPEGLLTYVGLKVKRDFACLYCS
DRCFSFQSLEAVRKHMIAKGHCKLRYGDGGDDEDVDLEDFYDYSSSYADVDGDQLMSVEN
MENSVELGSGGAELIIKQKTETGVLVRTLGSREFLRYYRQKPRPSPTREIALALSLATRY
RSMGLATVHSKESIVRMKVIREVNRRGVEAMRSKIGMRSNVIRNLPKNVPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcttacttgcaacgcttgcaacaaggagttcgacgacgaggtgcagcagaag
ctccattaccggtccgaatggcaccgttacaatctcaaaagaaaggttgcaggagtccca
ggagtaacagaagagttattccaagctagacagttcgctcttgccgaagagaatagcaag
ctgagtgcaacaccaatgctctatggatgtgctctttgtggcaaggactatagaagttca
aaggcacatgctcagcatcttaaatcacgagctcatgctatgaaaacattagagaacgtg
ggcccttcagctacagttattacaacagtaaaaccatacgctgctcgaacattaaataag
acaactagaatggctcaagtcattggagaaaatgaggatgatgatgagagtgaagatgaa
tgggaagaagtcaatcctaatgacatggctgtggcttccgaatctttgtcatttttgcat
gttgaggatggcaaagttgctgatgatgatgagcaagatgatgccattgatgaagaattg
gatacctcttgttgctttatttgtgatcaaaagtatgagagcatagaaagttgtatggtt
catatgcacaagcagcatggtttcttcatacctgatattgaatatttggaggatcctgag
ggccttcttacatatgttggtcttaaggtaaagagggattttgcgtgcttgtactgcagt
gatagatgtttttcctttcaaagcttggaagctgtaaggaagcatatgattgctaaaggt
cattgtaaattgcgttatggagatggtggtgatgatgaggatgtggatttggaagatttc
tatgattatagtagcagttatgcggatgtagatggtgatcaattgatgtctgtagaaaac
atggaaaatagcgttgaactcggaagtggaggtgctgagctcatcataaagcaaaaaaca
gaaactggagtgcttgtccggactctaggatctcgggaatttcttcgatactatcgccaa
aaaccacggccatcccctacacgtgaaattgcattggctctttctttagcgacaaggtat
cgcagcatgggcttggcaacagtacattcgaaggagtcaattgttaggatgaaagttatt
agggaggtaaaccgtcgtggagttgaagccatgcgctcgaagattgggatgaggagtaat
gtcattagaaatctccccaagaatgtgccatattaa
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