Zingiber officinale (ginger): 121975643
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Entry
121975643 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121975643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121975643
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121975643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121975643
NCBI-ProteinID:
XP_042383340
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Position
4B:complement(97307218..97309351)
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AA seq
330 aa
AA seq
DB search
MSSPVPRSSTKPTRLSPFFRDLASPISPHRRSAGQFSAPRHGAAVDSDLPPPPFFTLDDR
ADFSPEADLPPPSLVSPIGARSWGQKGSLSPSPSYSSSSRFLPTRAAEANGAGPSDRRGK
SPEGSSWAISPAENGGERDPDRSSPVDGVVEPGALIVLPPPPSRDLPRPELQGPVVLNGG
LEADTWVTVFGFSPADTNLVLREFEKCGPILKHVPGPRNSNWIHILYQKPYHAQIALKKN
GTQLNNLLVVGVKPVDPMHRHHLKESAHQINQGGFMVSLPSKVGTLSRSSNHADKSSNYS
SDQRHHHSNGIIATPANSLVSKVMDLVFGM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccccgtgccgcggagctccacgaagccgacgcggttgtctccgttctttcga
gacctcgcctcgcccatctctccccaccgccgatccgccggccaattctccgcgccccgc
cacggcgctgccgttgactccgacctccctcctccgcccttcttcacgctcgacgatcgc
gcggatttctcgcccgaggccgacctcccgccgccctctctggtgtcccccatcggcgcc
aggagctggggccagaagggatcgctctcgccttccccttcctattcatcctcttcccgc
ttccttccgacccgagccgcggaggcgaatggcgctggtccttccgaccggcgtgggaag
agccctgaaggctcgagttgggcgatttcgcctgccgaaaatggtggggaacgagatccg
gaccgcagctcgcctgtagatggggtggttgagccgggagcgttgattgtgcttccgccg
ccgccgagtagggatttaccgaggcctgagctgcaaggacctgtggtgctgaatggtggc
ctggaggcggacacatgggttactgtttttgggttttctcctgcagatactaacttggtt
cttcgggagtttgaaaaatgtggccccatattaaaacatgtacctgggcccaggaattcc
aactggatacacattctctatcagaaaccctatcatgcacaaatagctctcaagaaaaat
ggaactcagctaaacaatctgttggtagttggagtgaaacctgtagacccaatgcatcgc
catcatctaaaggaatcggcacaccaaatcaatcaaggaggcttcatggtttcattgccc
tccaaggttggcactttgagtcgatcatcaaatcatgcagataagtcttcgaattacagt
tctgatcagaggcaccaccattcaaatggaataattgcaactccagcaaattctcttgta
tccaaggttatggacttggtgttcggaatgtga
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