Zingiber officinale (ginger): 121975769
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Entry
121975769 CDS
T08725
Name
(RefSeq) probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00740
Riboflavin metabolism
zof00790
Folate biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
121975769
00790 Folate biosynthesis
121975769
Enzymes [BR:
zof01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
121975769
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
121975769
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
121975769
NCBI-ProteinID:
XP_042383543
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Position
4B:101576313..101585756
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AA seq
556 aa
AA seq
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MTSLAFSSSPVGLRFTRVHYGTRALSSFKKIVGLSCDKVSVNLIPNVTSNGYKRTICFAL
KGNGAFVTIPNSSEGDVESADSAVSEQDNAHNSYILQADATSIQTVVADISPVPNDFPIY
NGELDLDCPTKGFSSIPEAIEDIRQGKFVIVVDDEDRENEGDLIMAASLVTPEAMAFIVK
HGTGIVCASMKAEDLERLELPLMVSNKENEEKLCTAFTVSVDAKDGTSTGVSATDRARTV
TMLASPDSKSKDFNRPGHIFPLRYREGGVLKRAGHTEASLDLAVLAGLPPVGVLCEIVDE
SDGSMARLPKLREFAKEENLKIISIADLIRYRRKRDRLVECASIARLPLKWGSVQAYCYR
SLLDGMEHIAMVKGDIGDGHDILVRVHSECLTGDIFGSARCDCGNQLTLAMEMIEKAGRG
VLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILQDLGVR
TMKLMTNNPSKYHGLKGYGLSIAGKVPLLTPITNENRRYMETKKEKMGHIYGSDFNGHLS
SFIGSDATNEQQQASS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcttgctttttcttcatcgcccgttggacttcgtttcactcgggtgcattat
ggtacaagagcattgagttctttcaaaaagattgtagggttgagttgtgataaagtttca
gtaaatttgattcccaatgtgacatcaaatggttacaagagaacaatatgctttgcttta
aaaggaaatggtgcatttgtgacaataccaaactctagtgagggcgatgtagaatcagca
gatagtgctgttagtgaacaagataatgcacataacagttatattcttcaagctgatgca
acatccatccaaacagttgtagctgatatttctccagttccgaatgactttcctatctac
aatggagaacttgatttggattgtcctacaaaaggattctcctctattccagaggcaatt
gaagacattcgtcaaggcaagtttgtgattgttgttgatgatgaagatagagaaaatgag
ggagatctcattatggcagcatctttggtgacgccagaggccatggcttttattgtgaaa
catgggactggaattgtctgtgcgagtatgaaagctgaagatcttgaaaggttagagctt
cctctcatggtatcaaacaaagaaaatgaggagaaactatgcacagctttcaccgtctca
gtggatgctaaagatggtacaagtaccggtgtctctgctacagacagagctaggacagtt
acgatgcttgcttcacctgattcaaaatctaaagatttcaaccgtccaggtcatattttc
ccattgagatacagggaaggtggtgttttgaaaagagctggacataccgaagcatcactt
gatctggctgtattagctgggttacctccggttggagttctttgtgagattgttgatgaa
agtgatggttccatggctcggttacctaaactacgtgagtttgccaaggaggagaacttg
aagataatttcaattgcagatttgatcagatataggaggaaaagggataggttagttgaa
tgtgcttctattgcacgcctaccgttgaaatggggttctgttcaggcctattgttatcga
tcacttcttgatggaatggaacatattgctatggttaaaggagatattggagatggccac
gatatccttgtaagggtgcattctgagtgcctcactggtgacatatttggatctgctagg
tgcgactgtggcaatcagctcacactagctatggaaatgatcgaaaaagctggaaggggt
gtgctagtttaccttcgtggacatgaaggcaggggtatcggccttggtcacaaacttcgt
gcttacaatttacaagatgatgggcgggacactgtggaagctaatgaggagctaggatta
cccgtagattcacgggaatacggcattggagcgcagattctacaagacctcggcgttcgg
accatgaaactgatgacgaacaacccttccaagtatcatggactcaagggctacggattg
agcattgccggcaaagttcccctgctaactccaatcaccaacgaaaatagaaggtatatg
gaaacaaaaaaggaaaaaatggggcatatatatggatctgatttcaatggtcatctttct
agtttcatcggaagtgatgcaactaatgaacagcagcaggcttcctcctaa
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