Zingiber officinale (ginger): 121975872
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Entry
121975872 CDS
T08725
Name
(RefSeq) dynamin-2A-like isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121975872
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121975872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121975872
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121975872
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
121975872
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
121975872
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
121975872
RhoA-dependent endocytosis
121975872
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121975872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_8
PH_11
MMR_HSR1
FeoB_N
RsgA_GTPase
AAA_16
PH_20
Motif
Other DBs
NCBI-GeneID:
121975872
NCBI-ProteinID:
XP_042383716
LinkDB
All DBs
Position
4B:complement(104866872..104890529)
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AA seq
921 aa
AA seq
DB search
MEAIEELTQLAESIMLAAALLADEDIDEGSASKRASTFLNVVALGNVGVGKSSVLNSVVG
HPVLPTGENGATRAPIIIDLVRDVSLSSKSIMLQIDNKSQQVSASALRHSLQERLSKGTG
SRSSGKNRADEIYLKLRSCTAPPLKLIDLPGLDQRSMDESVVGDYAARNDAILMVIIAAA
QASDVTSSRALRMAKEFDAEGTRTVGIISKIDQAAGDQKSIAAVQALLLNQGPKSASDIP
WVALIEQSVSIASAQAGAVGSNNSLEAWNAETESLKAILTGAPQSKLGRVGLVDTLAKQI
RERMKIRFPNLLTGLQGKSQIVQDELFKLGEQMANTAEGTRAIALQLCREFEDTFLQHIS
SGEGAGWKVVATFEGNFPNKIKQLPLDKHFDINNVKRIVLEADGYQPYLISPEKGLRSLI
KCVLELAKEPSKLCVDEVHRVLLDIVSASANGTPGLGRYPPFKKEVLAIASAALENFRNE
ARKMVVALVDMERSFVPPQHFIRLVQRRMERQRREDELKHQSSKKANEESSSRPGIQQTG
GSLKSMKDKTNQSDKDAKEGSSLQIAGPSGEITAGWLLKKSGKASGWSKRWFVLNEKSGK
LGYTKKQEEKHFRGVITLEECNIEEASEEESLKSSKESKKANGSDKLSSLDFKITSKVAY
KTVLKAESALILRAESMADKVEWVNKMMNICKSSKEIPSKGSSGLEASTSIRQSHSDGSL
DTMARKPADPEELRWMSQEVRGYVEALLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSIS
AQSIARIEELLLEDQNVKHRREKFQKQQSLLSKITRQLSVHDNRASAANWSNGDTEIESS
PRRNAASGDDWRSAFDAGSKGPVRDSFRGSPRSKSADSRGSFRSSDSPQNGDSGLNSGDR
RMPNRLPPAPPQGSSSANRFL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatagaggagctcacgcaattggcggagtcgataatgctggcggccgctctt
cttgcggacgaggacatcgacgagggctccgcctcgaagagggcctctactttccttaat
gtcgtcgctctgggcaatgtcggagtcggaaaatcttctgtcttgaatagtgtggtcggc
catcctgttctgccgacgggagagaatggcgccactcgtgcgccgatcataattgatctt
gtgagagatgtatccttgagcagcaaatcaataatgttgcagatagataacaaatcgcag
caggtttctgcgagtgctcttagacattcccttcaggaaaggctgagcaagggcactgga
agtcgtagttcaggaaagaaccgggcagatgagatttacctgaagcttcgaagttgtaca
gctcctccgttgaaattgatcgatctgcctggattagatcagcggtccatggatgagtca
gtagttggtgattatgctgcacgaaatgacgcaatactgatggttattatagcagctgct
caggcatctgatgttacttcttcaagagctcttaggatggctaaagaatttgatgcagaa
ggaactaggactgtcggtatcattagcaaaatcgatcaagcagctggtgaccagaaaagt
attgctgctgttcaagctcttttgttgaatcagggaccgaagagtgcttctgatattcca
tgggtagctctcattgagcaatctgtgtctattgcttcagcacaagcaggagcagttggg
tctaataattcactggaagcttggaatgctgagactgaaagtcttaaagcaatacttact
ggagctccacaaagcaaacttggtagagttggtttggtggatacccttgctaaacagata
cgtgaaaggatgaagatcaggtttccaaaccttctcactggattacagggtaagtcccag
attgtgcaggatgaattattcaagcttggtgagcaaatggcaaatactgctgaaggtaca
agggctattgcattgcagctttgccgagaatttgaagatacatttctgcagcatatttct
tctggtgagggtgcaggttggaaagtagttgcaaccttcgaaggaaacttccctaacaaa
attaagcagcttccgttggacaagcattttgatataaacaacgtcaaacgtattgtgctt
gaagctgatggatatcagccatatttaatatctcctgagaaaggtctgaggtctttaata
aagtgtgttcttgaactcgctaaagaaccatcaaagctttgcgtagatgaggtccaccgg
gttctgctggatatagtttctgcctcagcaaatggtaccccaggactaggcagataccca
ccatttaaaaaagaggtgcttgcaattgcatctgctgccttggaaaatttcaggaatgag
gcaaggaagatggttgttgcacttgttgacatggaacgatcttttgttcctcctcaacac
tttattcgacttgtgcaacgcagaatggagaggcaacgacgcgaagacgagctgaagcac
cagtcgtcaaagaaggcaaatgaggaatcaagctctcggcctgggattcagcagacaggt
ggtagcttgaaatcgatgaaagacaaaacaaatcaatccgacaaagatgcaaaagagggc
tcatccttgcagattgctggaccatctggagaaataacagcagggtggttgctaaaaaaa
agtggaaaagcaagtggctggagcaagcgatggtttgtcctcaatgagaaaagtggaaaa
cttggatacactaaaaagcaagaagaaaaacattttcgaggcgttatcactttagaggaa
tgcaacattgaagaagcttcagaagaggaatctcttaagagttccaaagaatcaaaaaaa
gcaaatggatcagataaactttcaagtttagattttaagataaccagcaaagttgcttac
aagacggtgcttaaagcggaaagtgcattaattttgagggctgagagcatggcagacaaa
gttgaatgggtgaataagatgatgaatatttgcaaatcttccaaggaaattccttctaaa
ggctcatctggtcttgaagctagtacttcgattaggcaaagtcattcagatggttcactt
gacactatggctagaaaaccagctgatccagaagaacttagatggatgtcacaagaagtc
cgtggttatgtcgaggctcttttgaatagtcttgcagccaacgttccaaaggcagttgtg
ctttgccaagtggagaaagctaaggaagacatgctcaaccagctatatagctccataagt
gctcaaagcatagcaaggattgaagaactactactagaggaccaaaacgttaagcaccga
agagagaaattccaaaagcagcagtctctgctttcaaagattacacgccagcttagcgtt
catgataaccgagcatcggcagctaactggtctaatggtgacactgaaatagaaagcagc
ccgaggagaaatgctgcttcaggtgatgactggaggtcggcatttgatgccggttccaaa
gggccagtccgtgactcgttcagggggtcacccagatcaaaaagtgccgatagccgtggt
agtttccggtccagcgactcaccacagaatggtgactcaggtctgaactccggtgaccgg
cgaatgccaaacaggctacctccagcgccgcctcagggcagctcttcagccaacagattc
ctctag
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