Zingiber officinale (ginger): 121975881
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Entry
121975881 CDS
T08725
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121975881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121975881
03051 Proteasome [BR:
zof03051
]
121975881
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121975881
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121975881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR_2
K-cyclin_vir_C
Motif
Other DBs
NCBI-GeneID:
121975881
NCBI-ProteinID:
XP_042383726
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Position
4B:complement(105257799..105266413)
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AA seq
624 aa
AA seq
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MDADALSSSSPAVASVPPVQTACWSSVLQKKPTAHPQEAISTRVFGSLTSSKGISVAVLD
ANALIHGDKLANSADKFVSVPEVLDEVRDHVSRQRLSFLPFPVETMEPSPEFIKKVVNFA
RETGDLQTLSDVDLKVVALAYMLESQIHGIDHLRERPPPLHVVNVKNLPGAQLPGWGSNV
PNLAEWEALEEATEGGRDHNSKILGPRDMNNQVEPNSSSASIPDQHVEGSKTFDKPKRSF
APKKEIVLEGKKMVASGIDASQGEDTEIAGDWHPAVSRSTHRRFLRRKARRELSKEPEEN
GHSSSHEEVEGTKSEGDVELSDGGEVEYPVFNELETNGGHFQNEQQIELNHKEAALDFES
SQPSREGVEDDRLRTYIGSTPLEIEEDNSEYAVDSVYDDDAGIDDFSEELANLELDSQAD
ESTETTYIDDQSSEQSWMLKSLSESSVACVTSDYAMQNVLLQIGLRLLAPGGMQIRQLHR
WVLKCHACNKVTQEIGRIFCPKCGNGGTLRKVSVTVGENGIIMAARRPRIVLRGTKFSLP
LPQGGREAITKNLILREDQLPHKLLYPKSKKKTNKQGKEFLGADDIFSHADEKRAPLKPP
VRKALAMFGGKRNPNDNHFSRRKH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatgcgctctcatcttcctctccggcggttgcctcggttcctcccgtgcag
accgcgtgctggagctctgtgttgcagaagaagccgacggcgcatccccaagaggcgatc
tccacgcgagtgttcggaagcctcacgtcgagcaaaggcatctcggtggcggtgctcgat
gccaacgctctgatccatggcgacaagcttgccaattccgctgacaagttcgtgtctgtg
cccgaggtcctggacgaggtacgcgatcatgtctcgcgtcagcgcctctccttcctgccc
ttccccgtcgagaccatggaaccctctcctgaattcatcaagaaagttgtcaattttgca
cgagaaactggggatctgcagactctttcagatgtagaccttaaggtcgttgctctagct
tatatgttagaatcccagatccatggaattgatcatctaagggagaggccgcctcctctt
catgtggtgaatgtgaagaacctaccgggggctcaactgcctgggtggggttccaatgtt
cctaatttagcagaatgggaagccctggaagaagcaactgaaggaggtcgggatcataat
tctaaaatacttggaccgagagatatgaacaatcaagttgaacctaacagttcgtctgct
tccatacctgatcagcatgttgaagggagtaagacgtttgataagcctaaaaggtctttt
gcacccaagaaggagattgtgttggaggggaaaaagatggttgcttctggcatcgatgct
tctcaaggtgaagacactgaaattgcaggtgattggcaccctgcagttagccggagcact
catagaagatttttaagaaggaaagcaaggcgtgagttgtccaaagaaccagaggaaaat
ggccactcgtccagccacgaagaagtggaagggacaaaatctgaaggcgatgttgagtta
tctgatggaggtgaggtagagtatcctgtatttaatgaacttgaaaccaatggtggacat
tttcaaaatgaacaacaaattgagttgaatcataaagaggcggcattggattttgagtct
tcacaaccttcacgtgaaggtgtagaagatgacagacttaggacttacataggatctact
cctttagaaattgaggaagataactcagagtatgcggttgattctgtttatgacgatgat
gctgggattgatgacttcagcgaagagttagctaacttagaattggatagtcaggctgat
gaaagtactgagacaacttatatagatgaccagagcagtgaacagagttggatgctcaag
tccttatcagagtcaagtgtagcttgtgttactagtgactacgcaatgcaaaatgttctt
ctgcaaattggtcttcgactattagcaccaggagggatgcagattcgccaattacatagg
tgggttctaaaatgtcatgcttgcaataaagtgacacaagaaattgggagaatattttgt
ccaaaatgtggcaatggtggaactttaaggaaggtatccgtgacagttggtgaaaatgga
atcatcatggctgcacgccggcctcgaatagtccttcgtggaacaaaattctcgcttcca
ttgcctcaaggtggacgagaagctatcacaaagaacctcatcttacgagaagaccaactc
cctcacaagttactctatccaaaatcaaagaagaagacaaacaaacagggcaaggaattt
ctgggtgcagatgatatcttttcccacgccgacgagaagagagcccctcttaagcctcct
gtgaggaaagcgctcgctatgttcggtggaaaaagaaatcctaacgataaccatttttct
cgccggaagcactaa
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