Zingiber officinale (ginger): 121975961
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Entry
121975961 CDS
T08725
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121975961
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
121975961
NCBI-ProteinID:
XP_042383842
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Position
1B:complement(121733467..121735960)
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AA seq
619 aa
AA seq
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MPEAPKLMPVTLPPADDDAVPEHHRKALEFIDDVTENADVVQRRVLLEILSQNAPATYLH
RHGLSGRDAADLDAFKRLIPLVTYEDIRPDILRIAHGDTSPILCGRPISEFLTSSGTSGG
ERKLMPTIEDELNRRSLLYSLLMPVMSQFVRRLDKGRGMYLLFVKSEVCTPGGLVARPVL
TSYYKSHHFLNRPDDPYNLYTSPNEAILCSDSWQSMYAQLLCGLLHRSDVLRVGAVFASG
FIRAIRFLEKHWPRLCRDIRAGELDHEITDRAVREAVGRVLRPDGDLAHLIESECSRKTW
QGIIPRLWPNTKYVDVIVTGAMAQYIPTLDFYSDGLPLTCTMYASSECYFGLNLQPLSKP
DDVAYTLIPTMAYFEFLPVPCASSCCNTDDFDHRDLVDLVEVKLGQEYELVVTTYAGLYR
YRVGDVLRVVGFKNKAPQFKFIRRKNVALSIDSDKTDEVELHAAVSAAASHLEPFGASLV
EYTSYADALSIPGHYVLYWELREQGPGTTAPAVPASVLEDCCLAVEEKLNSVYRQGRVCD
KSIGPLEIRVVEEGTFDEMMDFSLSQGASINQYKAPRCVLAGPVVELLDGRVRSRFFSRK
CPKWAPGNKQWNILLDAIN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagcaccaaagctgatgccggtcactctccccccggccgacgacgatgccgtg
cccgagcatcaccggaaggccctcgagttcatcgacgacgtgactgagaacgccgacgtc
gtccaacggcgtgtgctcctcgaaatcctctcccagaacgcccccgccacgtacttgcat
cgccacgggctatccggccgtgacgccgccgacctggatgcgtttaagcgcctcatcccg
ctcgtcacctacgaagacatccggcccgacattctccgcatcgctcacggagacacctcg
cccatcctctgtggccgcccgatctcagaattccttacaagctcggggacatccggcggg
gagcggaagctgatgccgacgatagaggatgagctcaaccggcgctcgcttctgtatagt
ctactaatgccggtgatgagccaattcgtgcgcagactcgacaaaggcaggggaatgtac
ctactgttcgtgaagtcggaggtttgcacccccggcggccttgtcgctcgccccgtccta
acaagctactacaagagccaccacttcctcaaccgcccggacgatccgtataatctctac
accagccccaacgaggccatcctctgctcagactcctggcagagcatgtacgcccaactc
ctctgcggtctcctccaccgctccgacgtcctccgtgtcggcgccgtgttcgcttccggc
ttcatccgcgccatccgcttccttgagaagcactggccgcgcctctgccgcgacatccgc
gctggcgagctcgaccacgagatcactgatcgagcagtgcgtgaggccgtgggccgtgtg
ctgcgccctgacggggatttggcccacctgatcgagtcggagtgcagcaggaagacgtgg
cagggcatcattccccggctgtggcccaacaccaagtacgtggacgtcatcgtcaccggc
gccatggcgcagtatatccccacactcgatttctacagcgacggcctgccgctgacgtgc
accatgtacgcctcctccgagtgctacttcggcctcaacctgcagcccttgagcaaaccc
gatgacgtcgcttacaccttgatccccaccatggcctacttcgaattcctccccgtgcca
tgcgccagcagttgctgcaacactgacgacttcgatcaccgtgacttggtcgacctggtc
gaggtcaagctcggccaggagtacgagctcgtcgtcaccacttatgctggcttgtaccgt
taccgcgtgggcgacgttctgagggtggtgggattcaaaaacaaggcgccgcagttcaag
ttcatacggaggaagaacgtggcgctgagcatcgactcggacaagacggacgaggtggag
ctgcacgccgcagtgagcgccgccgcgagccacctggagccgttcggggcgtcgctagtg
gagtacacgagctacgccgacgcgctcagcattccggggcactacgtgctttactgggag
ctacgcgaacaggggccagggacgacggcgccggcggtgccggcgtcggtgctcgaggac
tgctgcctggcggtggaggagaagctgaacagcgtgtaccggcaggggcgggtgtgcgac
aagtcaatcgggccgctggagattcgggtagtggaggagggtaccttcgacgagatgatg
gacttctctctgagccagggagcttccatcaaccagtacaaggcgccgcggtgtgtgctg
gcggggccggttgtggagctgctcgatggccgggtgcgatccaggttcttcagccgcaag
tgccccaagtgggctccgggcaacaagcagtggaacatcctcctcgacgctattaattaa
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