Zingiber officinale (ginger): 121975998
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Entry
121975998 CDS
T08725
Name
(RefSeq) actin-related protein 5-like isoform X1
KO
K11672
actin-related protein 5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121975998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121975998
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121975998
INO80 complex (yeast)
121975998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121975998
NCBI-ProteinID:
XP_042383900
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Position
4B:complement(108568312..108579127)
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AA seq
721 aa
AA seq
DB search
MPPSSSSSFTRPSRQSDYARFSPTTPIVIDNGGSTFRIGWAGESDPRITFRNVVQRPRHK
ATGDAVTLVGDQDPALMKYFDCTRTSYRSPFDCNVVYQFEIMEYVLDYGFECLGANSEVN
HPILMTECICNPLSSRSKMAELLFETYGAPSIAFGVDAIFSYKLNQQYGRCYEDGLTVCS
GFSTSHVIPIVQGEPVTKACCRTNIGGFHITDYLKQLLSLKHPQHISNITWEKAEELKME
HCYVAQDFTSELQQFQKGNEDAKEKTRCWQLPWVAPTQGEVPSEEELTRRAALKEKQGQR
LRDMAAARRSLRITELENELNGLENLSQQLDEVDEHDVSSILAGTKFYSRQEIESNIIRL
TQSLRKAKGEPIEVEEKNDASLLEKYPLASVPDEMLTPEQLKEKKKQIFLKTTSEGRLLA
KQKRLEEESIRERQNQLDEEKRLENPELYLEQMHARYRELCERVEQRKKPKTNGNHNLLG
GVGRGERLTAAQKERMRLLTSAAFDRGKGEDTFGARDEDWQLYKLMSKDNDDDDNSLDEE
EAELARVTCRLQDIDPNFVPRSDLVPIPGGTTEFQKFRPQTAEDFQIILDVERFKCPEVL
FQPNMIGIDQAGLDEMAGISLRRLPSVDDSLKAEMSKSVLVTGGCALLPGLLPRLEAGIR
QLRPYLSPLKVVRASDPVLDAWRGASRYANSPHFTLQTISIQDYYEKGESLLRQYQMKYT
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgtcttcctcgtcttcgttcacgaggccgtcgcggcaatcggattacgcgcgc
ttctctccgaccacccccattgtgattgacaacggtggctccaccttccgaatcgggtgg
gctggggagtcggatccacggatcaccttccgcaacgtcgttcagaggcctcgtcacaag
gccaccggtgatgcggtcacgttagttggtgatcaagatcctgctttgatgaagtacttt
gattgcacaaggacatcataccgttcaccatttgattgcaatgtggtttatcagtttgaa
atcatggaatacgtacttgactatgggtttgagtgcttaggtgctaattcagaggtcaat
catcctattttaatgacagaatgtatatgtaatccactatcctcacgcagtaaaatggct
gaacttctctttgagacttatggtgcaccatccatagcctttggagttgatgctatcttt
agttacaagttgaaccaacagtatggaagatgctatgaagatggtctcactgtttgctct
ggattttcaacaagtcatgtgataccaattgtgcaaggggaacctgttactaaagcatgc
tgcagaacaaacattggtggatttcatattactgattatctgaagcagcttctttccctc
aaacacccacaacacatatcaaacattacatgggagaaggctgaggagcttaagatggaa
cattgttatgtagcacaagattttacttctgaattgcagcagtttcagaaaggaaatgaa
gatgctaaagaaaaaactaggtgctggcaattgccatgggttgcacctactcaaggagag
gtaccttctgaagaagaacttacacggagagctgctttaaaggagaaacaaggacaacga
ttgcgagatatggctgctgctcgtaggtctttgaggataactgaactggaaaatgaactg
aatggtctggaaaatttgtcgcaacaacttgatgaggtggatgaacatgatgtgtcatct
atcttagctggaacaaagttctactcaaggcaagaaattgagtccaacattattaggttg
acacaatctttgcggaaggctaaaggtgagcctattgaggttgaggagaaaaatgatgct
tcattgttggagaaatatccacttgccagtgtacccgatgagatgctaacccctgaacag
ttgaaagaaaagaagaagcagatatttctaaagaccacctcagagggccgtttacttgcc
aaacaaaagcgtcttgaagaggaatcaatacgggagagacagaatcaactagatgaagag
aagcgtttggagaatccagagttgtaccttgaacaaatgcatgctcgatacagagaattg
tgcgagagagttgagcaaaggaaaaagccaaaaacaaatggcaatcataacttattagga
ggtgtagggcgtggcgaacgcttgactgctgctcaaaaggaaaggatgcgcctcttaaca
tctgctgcatttgaccgaggaaaaggtgaagacacctttggagctagagatgaagactgg
cagctctacaaactgatgagtaaggacaatgatgatgatgacaatagcctggatgaggag
gaagcagaactagctcgtgtcacatgcaggctccaggacatagatccaaattttgttcct
agatcagatttagtcccaatcccaggaggaaccactgaatttcagaagttccgtccccaa
actgcagaggatttccagatcattctcgatgtggagcgttttaaatgtcctgaagttcta
tttcagcccaacatgattggtattgatcaagctgggcttgatgagatggcaggaatctca
ctccggaggcttcccagtgtagacgattcgctgaaggctgaaatgtcaaaatctgtactt
gttactggaggctgtgctcttcttcctggattgttgcctcgcctggaagctggaatcagg
caactccgcccttacctctctcctctaaaagtggtcagagcatctgatccagtgttggat
gcatggaggggtgcatcaagatatgcaaattctccacattttactttgcagaccattagc
atacaagattattacgagaaaggggaaagcttgctgcggcagtaccaaatgaagtatacg
atttga
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