Zingiber officinale (ginger): 121976004
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Entry
121976004 CDS
T08725
Name
(RefSeq) serine/threonine-protein kinase rio2-like
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121976004
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zof01001
]
121976004
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121976004
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121976004
Protein kinases [BR:
zof01001
]
Serine/threonine kinases: Other
RIO family [OT]
121976004
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Kinases
121976004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
ABC1
APH
Kdo
OspG_kinase
Pkinase
Motif
Other DBs
NCBI-GeneID:
121976004
NCBI-ProteinID:
XP_042383908
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All DBs
Position
4B:108984836..108993183
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AA seq
464 aa
AA seq
DB search
MKLDVNSLRYLSKDDFRVLTAVEMGMRNHELVPAELVDRIAGLRHGGTYKVLKNLLKHKL
VHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFNAVGRQIGVGKESDIFEVATEDGTILVM
KLHRLGRMSFRAVKSKRDYLKHRSSYNWLYLSRLAALKEFAFMKALGEHEFPVPDAIDCN
RHCVVMSLVQGYPLVQVQQLQNTDEVLETIVGLVVRLAEHGLIHCDFNEFNIMIDDNEKV
TMIDFPQMVSVSHRNAKMYFDRDIECIFKFFAKRFKLVYEDDECDGAEADEEENGRPSFS
SIAKSVGFLDRELSASGFTRKDQDDIEKFIEGGTEQTDITSSEDELEEQVQAETETDASI
VQNIDLLKLEDQNNEKKSKDDTSCNENGENDDGILQPGQNSEKDSDNESDDGDDDELTKR
LYRQRRRAIAAAQGTRRAGSRNAYKDKGGKSGHNSKVQRQFCKW
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgacgtaaactctctgaggtatttgtccaaggacgattttagggttctcacg
gctgtcgagatgggcatgagaaaccatgaacttgttccagctgagctcgttgatcgcatt
gcgggcctcaggcatggtgggacgtataaagtgttgaaaaatttgttgaagcataagcta
gtacatcacgattcttccaagtatgatggtttccgtctcacatatcttggatatgatttc
cttgctattaaaactcttgtcaatcgtggtgtgtttaacgctgtaggtcgtcaaattggc
gtgggaaaggaatcagacatatttgaggttgctaccgaagatggaacaattttggtgatg
aagttgcataggcttgggagaatgtcttttagagctgtgaagtctaagcgtgactatttg
aagcaccgaagtagttacaattggctctatttatcacgacttgcagctcttaaggagttt
gcttttatgaaggcgctaggagagcatgaatttccagttccagatgctattgattgtaac
cgacattgtgtagtcatgtcacttgttcaaggttatccacttgtccaagtccaacagttg
cagaacacagatgaagtattggagacaattgttggtcttgttgttcgcttggcagaacat
ggtcttatacattgtgacttcaatgagttcaatatcatgatagatgataatgaaaaggtc
accatgattgactttccacagatggtatcagtttctcatcgcaatgcaaaaatgtacttt
gatcgcgatattgagtgcattttcaagttctttgccaaaaggttcaaacttgtgtatgaa
gatgatgagtgtgacggggcagaagctgatgaggaggaaaatggaaggccatctttctct
tctatagctaaatctgttggtttcttggacagggaactttctgccagtggttttacacga
aaagatcaagatgacatagagaagtttattgaaggaggaacagagcaaactgacattaca
agttctgaggatgaacttgaggagcaagtgcaagcagaaactgaaacagatgcttctatt
gtacaaaatatcgatttattaaagttagaagatcagaataatgagaagaaatctaaggat
gatacttcatgtaatgaaaatggagaaaatgatgatggaatattgcaaccagggcaaaac
tcagaaaaggacagtgataatgaatctgatgatggagatgatgatgaactaacaaagcga
ctatacagacagaggcggcgagccatagcagcagctcaaggcacaaggagggcaggatca
agaaatgcttacaaggacaagggtggcaagtctgggcacaattcgaaggttcagagacaa
ttttgcaagtggtga
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