Zingiber officinale (ginger): 121976095
Help
Entry
121976095 CDS
T08725
Name
(RefSeq) tRNase Z TRZ1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121976095
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121976095
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121976095
Prokaryotic type
121976095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
121976095
NCBI-ProteinID:
XP_042384036
LinkDB
All DBs
Position
1B:122210397..122214718
Genome browser
AA seq
299 aa
AA seq
DB search
MGSRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCP
QRAISQEFLFITHGHMDHIGGLPMYVATRGLYSMKPPTIFVPVSIKEHVEKLFEVHRAID
QSELKHNLVALNVGEEFQLRNDLKVRAFKTYHVIPSQGYCIYSVKKKLKAEFCGLSGNEI
KSLRLSGVEITDTITTPEIAFTGDTMSDFVVDPDNSDVLNARILVMESTFVNDAMSVQHA
RDYGHTHLFEIASYENRFQNKAILLIHFSARYYPEEIEAAIAKMPPSFSGRLFALTNGF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcgcagaagcaaagcggatagtgaagcaagtgctgaacagtcttcgttagtt
ccaagaaagaagccactggtgatcgaagggtatccagttgaggggttgtcaattggaggg
caggagacttgtgtcatcttcccgtcacttaagttggcctttgacattggtagatgcccg
cagcgagccatttcccaggaatttctgttcattacccatggccatatggatcacatagga
ggacttcctatgtacgttgctactagaggattatatagcatgaagcctccaactatcttt
gtcccagtgtctataaaagaacatgtggaaaaactgtttgaggtgcacagggcgattgac
caatctgaactgaagcacaatttagtcgcccttaatgtaggcgaagaatttcaattgaga
aatgatcttaaagttagagcattcaagacctaccatgttatacctagccagggttattgt
atctactctgtcaaaaaaaagcttaaggcagaattttgtggtctttctggaaatgagatt
aagagcttgcgactatcaggtgttgagattactgacacaataacaactcctgaaattgcc
ttcactggagatacgatgtcagattttgttgttgaccctgacaattctgatgtacttaat
gcaagaattcttgtgatggagagcacttttgtgaatgatgcaatgtcagttcaacatgct
agggattatggccacacccatttgtttgagatcgcaagttatgagaaccgattccaaaat
aaagcaattttgctcatccatttttcagctcgttattatccagaggaaatcgaggctgcc
atcgccaagatgcctccatcgttttctggtcgtctcttcgccttgacaaatggtttctaa
DBGET
integrated database retrieval system
