Zingiber officinale (ginger): 121976113
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Entry
121976113 CDS
T08725
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121976113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121976113
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
121976113
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121976113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_2
HEAT_EF3_N
HEAT
TOR1L1_N
Cnd1
PPP2R1A-like_HEAT
YebO
Motif
Other DBs
NCBI-GeneID:
121976113
NCBI-ProteinID:
XP_042384041
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All DBs
Position
4B:complement(114566418..114593456)
Genome browser
AA seq
725 aa
AA seq
DB search
MASHSPSVFHPYIKALSSPVLSAVGERYYKVTAEALRVCGELVRVLRPNFETSMPDFRPY
VSPIYSAILARLANQDQDQEVKECAISCMSLVISTFGDNLQKDLPACLPILVDRMGNEIT
RLTAVKAFAVIANSPLRINLSCVLEQVVSELTGFLRKANRALRQATLGTLNSLVVAYGEQ
ISSTTYEVIIVELSTLISEADLHMTALALELCCTMMMAKISSQSVGVTVSHKVLPQALIL
IRSSLLQGQALQALQRFFASLVHSANTSFDSLLDSLLSSAKPSPQSGGLAKQALHSVAQC
VAVLCLAAGDQKCASTVDMLKGILKDDSNMNSAKQHLALLCLGEIGRRKDLSVHVHIENI
VIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILDQIDNQQKKQYLLLHSLKEVIARQ
SIDQPGKSELQESNVEKILSLLFNHCESDEEGVRNVVAECLGKIALIEPKKLVPALKERT
ASSTAFTRATVVIAIKYAIVERPEKIDEILYPEISTFLMLIKDSDRHVRRAAVLALSTAA
HNKPNLIKGLLPELLPLLYDQTVIKKEMIRTVDLGPFKHIVDDGLELRKAAFECVDTLLD
SCLDQMNPSTFIVPYLISGLSDHYDVKMPCHLILSKLADKCPAAVLAVLDSLVDPLEKTI
SHKPKADAVKQEVDRNEDMIRSAFRAIASISRISGGEYSLKFKMLINNILNTAALAEKYN
FVRCE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacattcaccatctgtatttcatccgtacatcaaggctctctctagtcctgtt
ctatctgctgttggtgaaagatactataaagtaactgctgaagcattaagggtttgcgga
gaattagttcgtgtacttcgccctaattttgagacttccatgccagacttcagaccatat
gttagccctatctatagtgccatattggctcgcttggcaaatcaagatcaagatcaggag
gttaaagaatgtgcaatatcttgtatgagccttgtgatatcaacttttggtgacaacctt
caaaaggatctaccagcttgccttcccatactagttgataggatgggaaatgagatcacc
aggctaacagctgtgaaggcatttgctgtaattgctaactcgcctctgcgcataaacctc
tcatgtgttttggaacaagttgtttctgaactgacgggattcctgcggaaggctaacaga
gccttgagacaggcaacattgggcacactcaactccctagtagttgcatatggcgagcaa
attagctcaacaacttatgaagttataatagtggaactttcaacacttataagtgaggca
gacttacatatgactgcacttgctctggaactttgctgcacgatgatgatggccaaaata
tctagtcaaagtgttggtgtgactgttagtcataaagttcttcctcaagctcttatacta
atcaggagctcgctgttgcagggtcaagctttgcaagcattacagagattctttgcttcc
ttggttcattcagcaaatacaagctttgattcactattagattccctcctttcaagtgct
aagccttcaccacagtctggtggtcttgctaaacaggctcttcattctgttgcacagtgt
gttgctgtactttgcttagcagctggtgatcagaaatgtgcatccactgtagacatgctg
aaaggaattctgaaagatgatagcaatatgaattctgctaaacaacacctggcattgcta
tgtctgggagaaattggaagaaggaaggatctaagcgtacatgtgcacattgagaatatt
gttattgagtcattccagtctccttttgaagagataaaatctgcagcttcatatgctctt
ggaaacattgctgtgggcaatctatctaaatatcttccatttatcttggatcaaattgac
aatcaacaaaaaaaacaataccttttgcttcattctttgaaagaggttattgctagacaa
tctattgatcagcctggcaaaagtgagttacaggagtctaatgttgagaagatattgagc
ttactcttcaatcattgtgaaagtgatgaagaaggggttcgcaatgttgttgctgagtgt
ttgggcaaaattgcgcttattgaacctaaaaagctcgtacctgcactaaaggaacggact
gctagttctactgcattcacaagagcgacagttgttattgctattaaatatgctattgtt
gaaagacctgaaaagatagatgaaattttgtatccagagatctccacattcttgatgctc
attaaagacagtgatagacatgttcgtcgtgcagctgttctggctttgagtacagctgct
cataacaaaccaaacctgattaaaggacttcttcctgagttattaccgctgctctatgat
cagactgtcattaagaaagaaatgataagaacagttgatcttggtcctttcaagcacatt
gtagatgatggtcttgagcttcgaaaagcagcttttgagtgtgtggacaccttgttggac
agttgtctagatcaaatgaatccctctacatttatagttccttacctgatttctggatta
agtgatcattatgatgtgaagatgccatgccatcttatcctctcaaaacttgcagataaa
tgccctgctgctgttcttgcagttctggactcacttgttgatcctcttgaaaagaccatc
agtcacaagccaaaggcagatgcagtgaagcaagaagtagaccgtaatgaagatatgatt
cgaagtgcttttcgagctattgcttccataagccgcataagcggaggtgaatacagtttg
aagttcaagatgctgatcaataatattttgaacaccgccgcacttgctgaaaagtacaat
tttgtgcgctgtgagtga
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