Zingiber officinale (ginger): 121976151
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Entry
121976151 CDS
T08725
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121976151
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121976151
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
121976151
NCBI-ProteinID:
XP_042384111
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Position
4B:116761104..116768121
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AA seq
617 aa
AA seq
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MVEIGKRQQRDNDYEGKQQKKRLGYKDNTSDSELVVYRILCPVGVIGGVIGKSGKVINTI
RKETHAKIQIVDPFPGADKRVITIYCYVREKNHIDIDEDVLEPLCPAQDALLKVHEAIVN
VLDNSNDTERPYKHECHMLVPASQSANIIGKSGTTIKKLRSKTGANIQITSKDPANAAHS
CAMSYDNFLQITGDAEAVETALTAISAIMYKFSPKEEISLDTSIPDLPPIIIPSDVPIIP
AGSLYSHTDSLLSPGSVPPVIPASRFSSEISGFTDTTNVWPFLPSTVPIVPGYGAPTHSE
DLVLQVLCPSDKIGRVIGKGGSTIKSIRQSSGATISVDDKKDDTDECIITVTSTESTNDV
KSSAIEAVLLLQEKINDQDDNNANIRLLVPSKAIGCLIGKSGSIINDMRKSTKAIIYISK
GKKPKNASSDSELVEVSGEVGRLRDALRQVVFRLREDSLKDKESNQNVHKDTNQNVPLHS
SSLSVPQVLPENPPRAPLSYDHRVEAERGLGGFSGSSLYGYNTMPARDSYGSLSSYSSKS
YGGGLPAYFDIVIPPGALSKVMGKGGTNLDNIRKISGAHVEVVDSKTSPFERVARISGTA
EQKRTAENLIQAFIMST
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatcggaaagcgccagcagagagataatgactatgaaggaaaacaacagaag
aaaagactgggttataaggataatactagtgatagtgagctggttgtatatcgtatcctt
tgtccagttggtgttattggtggagtgattggcaagagtggtaaagtcataaacaccata
aggaaggagacacatgctaaaatccaaattgttgatccttttcctggtgcggataagagg
gttattactatttattgctatgttagggagaagaatcatattgatattgatgaagatgtt
ctggaacctctctgtcctgctcaggatgcattactgaaggtccatgaggctatagtaaat
gttctcgataactctaatgacactgaaaggccatacaaacatgagtgtcatatgcttgtg
ccagcaagtcaatctgcaaatatcattggtaagtctgggactaccatcaagaagctgaga
tccaagactggagcaaacatccaaatcacttcaaaggatcccgctaacgctgcacattcc
tgtgcaatgagttatgataattttcttcagattactggtgatgctgaagcagttgaaaca
gcattaactgctatttctgctatcatgtacaaattctcacccaaagaagaaatttctctc
gatacctcaattcctgatcttccacccattataattccttcagatgttcctataattcca
gctggcagcctctattcccatacagactctcttttgtctcctggatcagtgccaccggtc
atacctgcatctcgcttctcatctgaaatttctggttttactgatacaacgaatgtatgg
ccattcttaccatcaactgttcctattgttcctggatatggtgctccaactcattcagag
gacctggtcctccaagttctatgcccatcggataagattggacgtgtaatcggcaaggga
gggagtaccataaagagcataaggcaatccagtggagcaactataagtgttgatgacaag
aaggatgatactgatgagtgtattatcacagtcacctctactgagtcgaccaatgatgtg
aaatcttctgcaatcgaagctgttttgctgcttcaagaaaagattaatgatcaagatgac
aacaatgctaatatccgtcttcttgttccttcaaaagccataggatgcttgataggaaag
agtggttccattataaatgatatgcgaaagtcgactaaggcaattatttacatatccaag
gggaaaaaacccaaaaatgcttcttctgactctgagcttgtggaggtgtctggggaggta
gggaggttgcgtgatgcacttcggcaagttgtatttaggctcagagaagattctttgaaa
gataaggagagtaatcagaatgttcacaaggataccaatcagaacgttcctcttcattct
agcagtttgtcagtaccgcaagtgttacctgaaaatccacctcgtgcaccgctgagctat
gaccatagagtagaagctgagaggggactgggaggattctctggcagtagtttatatggt
tacaacacaatgccggctagagatagttatggatcactgtcttcgtattcatcgaagtct
tatggaggaggattacctgcatattttgatatagtgattcctccaggagccttatcaaaa
gtaatgggaaaaggaggcacaaaccttgataatatcagaaagatatcaggggctcatgtg
gaagttgtggactcaaaaacatctccctttgaacgagttgcacgtatttctggtaccgcc
gagcagaagcgtacggcagagaacctaattcaggctttcatcatgtctacttaa
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