Zingiber officinale (ginger): 121976173
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Entry
121976173 CDS
T08725
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121976173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121976173
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121976173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121976173
NCBI-ProteinID:
XP_042384146
LinkDB
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Position
4B:117510555..117521116
Genome browser
AA seq
454 aa
AA seq
DB search
MDSDEGKLFVGGISWETSEEKLKEHFSDYGEVLDAVIMRDKASGRPRGFGFVVFGDPAIL
DRVLQDKHVIDDRTVEAKRALSREEQQTSQRSGNPNSGNSNAGRSAGAGFGANIRTKKIF
VGGLPPTLTEDGFRQYFEAYGMVTDAVVMYDQNTHRPRGFGFISFESEDTVDKVLQKTYH
DLNGKAVEVKRALPKDANLNSGSSRPMGSVSHHSYGGSSGNASSYDGRTDANRYMQPQGA
VGGLQAYGSSGYGAPSYGYGATNNGVGYAGYGVGGYGTGATGYTGPAGAYGNPNAPMAGY
VGGPPGAQRNLWNNQVPGYGSAGYGGAASYGPGGGSGATPTGQSGTSGYMGQGYGYGGYG
SEGPYGNQGGYGSYGTRGSGGPVNNSAGNAGEQGGSAYTGGGYGNASSGYPNAWKSDPSQ
TGSYGSSQVNGPPGGSASYGGGYAGPQGRQVQQQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggattcggacgaggggaagctcttcgttgggggtatctcgtgggagacctcggaggaa
aagctcaaggagcacttcagcgactatggcgaggtcctcgacgccgtcatcatgcgggac
aaggcctcgggacgccccaggggttttgggtttgtcgtcttcggcgaccccgctattctt
gatcgcgtcctccaggacaagcacgtcattgatgaccgcactgtggaagccaaaagggct
ctgtcgagggaagaacaacaaacatctcaaagatctggaaatcccaattctggaaattct
aatgctggtaggtcagctggagcaggttttggtgcaaacataaggaccaaaaagatattt
gttggaggcttgcctccaactctaaccgaggatgggtttcgtcaatactttgaggcctat
gggatggtgactgatgcagttgtgatgtatgatcaaaacactcatcgccctcgaggcttt
ggcttcatttcttttgaatcagaggatactgtagataaagttcttcagaagacttatcat
gatctgaatggaaaggctgtggaagttaagcgtgcccttccgaaggatgcaaatctaaat
tctggcagtagccgacctatgggaagtgtatctcatcattcatatggtggttcaagtggc
aatgctagctcttatgatggtaggacagatgctaataggtacatgcaaccccaaggagct
gttggtggccttcaggcgtatggttcctctggctatggtgcacctagttatgggtatgga
gcaacaaacaatggtgttggctatgcaggttatggtgtggggggttatggcaccggtgcc
actggttacactggacctgctggtgcttacggaaatcctaatgctccaatggctggttat
gtaggtgggcctccaggagctcaaagaaatctctggaataatcaggttcctggttatggt
tctgcaggatatggtggagctgcatcttatggtccaggtggtgggtctggtgcaacacca
actggtcaaagtggaacctctgggtacatgggtcaaggttatggatacggtggatatggg
tcagaaggaccttatggtaatcaaggtggatacgggtcctatggtactcgtggtagtggt
ggccctgttaataattctgcaggcaatgcaggagaacaaggaggttctgcttacacaggt
ggaggttatggtaacgcaagctcgggttatcccaatgcttggaagtcagacccttcacaa
actgggtcatacggatcttctcaggtgaatggcccgcctggtggttcggctagttatgga
ggtggttatgctggtcctcaaggtaggcaagtccagcagcagtga
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