Zingiber officinale (ginger): 121976258
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Entry
121976258 CDS
T08725
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121976258
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121976258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
121976258
NCBI-ProteinID:
XP_042384286
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All DBs
Position
4B:complement(119641033..119656063)
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AA seq
500 aa
AA seq
DB search
MNGSFNGQILVDKLTRLNNSQQSIETLSHWCIFHRYKAKQVVETWEQQFYSSPREQRVSF
LYLANDILQNSRRKGLEFINEFWKVLPDALSDVFANGDDIGRKTVQRLVNIWEERKVFGS
RGQILKEEILGRKLEDKNKNGKAITQNLNQSSGILEKIISSYDKLSDEDSLFGKCQAALN
IIDKVEKELGSDFEIGSANGSEIIGNLQIQHGILGECIEQLKASELSRATLISYLREALN
EQELKAEQTGHQLQVAELRCKQAGNILSQLNVEQQPPATQNPTEALRFAPEVTASSAVDA
QITLSRCTQEEPLPDMKPSLSEENRKTEAAAVAAKLTASASSAQMLSFVLSSLASEGVIG
PANKEESPDSKRLKLQNSLPPPHPLLQVPMPPSFSHPEAMHQLPPPQSSSPNLEPPSTSV
SLATPSPSTSVQFMQSAAGPMTGVPYAYGSAPPPLPNYPMFGMHPNLSSPSPFYSFQPPE
GPNLVLQPPLPSGPPPLTRQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatcattcaatgggcagattttggtggataagcttaccagacttaacaattca
cagcagagtatagagaccttatcacattggtgcatcttccatcggtacaaagctaagcaa
gttgttgaaacctgggagcaacaattctattcctcccctagggaacaaagagtttccttc
ttgtatttggccaatgatattttgcagaacagtcggcgaaaaggtttagaattcattaat
gaattctggaaagtgcttcctgatgctttatctgatgtatttgctaatggagatgatatt
ggaaggaaaactgtgcaaagattggttaacatttgggaagagcggaaagtttttggttca
cggggacaaattctcaaggaagagatactgggaaggaagcttgaagataaaaataaaaat
ggaaaggcaattactcaaaacttgaaccaatctagtggaatactggaaaagattatttca
agctatgataaactttctgatgaagattctttatttggaaaatgtcaagctgctcttaac
atcattgataaagtagaaaaggaactgggaagtgattttgaaataggaagtgcaaatgga
tctgaaattattggtaacttacaaattcagcatggcattctaggagagtgcattgagcaa
ctgaaggcatctgaattgtctagagcaactctaatctcatatttaagagaggcacttaat
gagcaggaactaaaggctgaacaaactggccaccaactccaggtcgctgaattacgatgc
aagcaagcaggtaacatcttatcgcagctcaatgtggaacaacaacctccagccacacag
aacccgactgaggcattacgctttgctcctgaagtgactgctagctctgctgttgatgct
caaatcacgctgagtagatgcacccaggaagaacccctccctgacatgaaaccttctctc
agcgaagagaacaggaaaacagaagctgctgcagttgcagcgaaactcacagcatctgct
tcttcagcccaaatgctaagcttcgtcctctcatctctggcctcggaaggcgtcatcggc
ccggcaaataaagaagaatcccctgatagcaaaaggctaaagctacagaacagcctgccc
ccacctcaccctcttcttcaagtgccgatgccgccgtcattttcccatccggaagcaatg
catcagcttcctcctccgcaatcgtcatcccctaacctggaaccaccatccacttcagtg
tcactcgcgacaccatcaccatcaacttctgtccaattcatgcaatctgctgcggggcct
atgacaggcgtcccttacgcgtatggctcagctccgccacctctaccaaactatccaatg
tttggcatgcatcccaatctaagttctccaagcccattctacagctttcaaccacctgaa
ggccccaacctcgttttgcaaccaccgttgccatcgggaccacctcccctgactcgacaa
taa
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