Zingiber officinale (ginger): 121976378
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Entry
121976378 CDS
T08725
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121976378
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121976378
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
121976378
NCBI-ProteinID:
XP_042384450
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All DBs
Position
4B:complement(123168848..123173179)
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AA seq
602 aa
AA seq
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MGVGGSFWDLLKPYARNEGIDFLREKRVAVDLSYWIVQHDAVIRRRKPNARNPHLRNTFF
RTVALFSKMGAYPVFVVDGEPSPLKSQARIERFFRMSGLDPSELPKPVEGEGEVTPVRQR
NRFFTKYVRECMELLKLLGMPVIEAHCEAEALSAQLNREGQVDACITADSDAFLFGAKCI
IKGLSSNSKEPFECYNISDIEAGLGLKRKQLIAIALLVGNDHDLHGVPGFGVDNAVRFVR
LYSDDEILDRLSMIGKGDLDIENGIATSSTMFSMTVKSPHCTHCGHPGRKSVHIKIACKQ
CVMNGSHTCMKKPSGFKCTCSSCDEAHKLKEHQRHEKWQVKMQKSIAAMPKFPNNEIIAL
YLNDSYGYFDGKDGLMLKWDKPKVEHLVDFLSFHQNWEPSYIRQKMLPLLCTIYLREIAS
TQNDNLLLNDQYKFHSIMQQKIKHGHPFYLIKWMRDAICTIHSVSNEQAELLPLQSPGSD
ESIDLLDEPDGPTILVDDGCFFLLTDENMDLVRAAFPKEVDRFLELKKSRCKNKVETSIR
LASPISTEVQLSIKRFYRSTKAVAQDHEKGSFIDSSPCGKREKPTNLDKNLPKSVRRRLL
FD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcggcggaagcttctgggaccttctgaagccctatgcgcgcaatgagggcatc
gatttcctccgcgaaaagcgtgtcgccgtcgatctctcctattggatcgttcagcacgac
gccgtcattcgaaggcggaaacctaacgctcggaaccctcacctgcgcaacaccttcttc
cgcaccgtcgctctcttctccaagatgggggcgtatccggtatttgtggtggacggtgag
ccgtcgccattgaagtcgcaggcaaggattgagcgtttcttccggatgtctggcttggat
ccctcggagctgccgaaacctgtagaaggtgagggggaggtgactcccgtgaggcagagg
aaccgcttcttcaccaaatatgtgcgagaatgcatggagctcctcaaactactagggatg
cctgttatagaagctcattgtgaagctgaagctctttctgcacaactaaatcgtgaaggt
caagtggatgcttgcattactgccgacagcgatgccttcctttttggagcaaaatgcatt
ataaagggcttaagttctaattctaaagagccattcgagtgctacaatatatcagatatt
gaagctggccttggtttgaaaagaaaacaattgattgctattgctcttcttgttggcaat
gaccatgacttacatggggttcctgggtttggtgttgataatgctgttcgctttgtgcgg
ttgtattctgatgatgaaattttggatcggttatccatgatagggaagggagatctagat
atagaaaatggaattgcaaccagttcaactatgttttctatgactgttaaatccccacac
tgcacacattgtggtcatccaggcagaaaaagtgttcatatcaagattgcttgtaagcag
tgtgtcatgaatggttcacatacatgcatgaaaaagccatctggcttcaaatgcacatgc
tccagttgtgatgaggcgcacaaactcaaggagcatcaaagacatgaaaaatggcaagtt
aaaatgcaaaaatctattgctgctatgcctaagttcccaaacaatgagatcattgcatta
tatttaaatgatagctatgggtattttgatgggaaagatggcctaatgctcaaatgggat
aagcctaaagttgagcatctggttgacttcttaagttttcaccagaactgggaaccctct
tatatacgccagaagatgcttcctttgctatgtactatttacttgagagaaatagcctct
actcaaaatgataacttacttttgaatgaccagtataaatttcactcaattatgcaacag
aagatcaagcacggtcatcctttctacttaatcaaatggatgagagatgctatttgtact
atccattctgtttctaatgaacaagccgaactactcccacttcagtcacctggatctgac
gagtcaattgatctattagatgagccagatggtccaacaattctagtagatgatggatgt
ttttttttgttgacggatgaaaatatggatctcgtacgagctgcattcccgaaggaggtt
gataggttcttggaattaaagaagagcagatgtaaaaacaaagttgaaacgtccatcaga
ttggcatctcctatatcgactgaggtccagcttagcattaagcggttttatcgttctaca
aaggctgtggctcaagatcatgagaagggttcattcatagacagttcaccatgcggcaaa
agagagaagccaactaacctggataagaacttgccaaagtctgtcaggagacggctctta
tttgactag
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