Zingiber officinale (ginger): 121976405
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Entry
121976405 CDS
T08725
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
121976405
04075 Plant hormone signal transduction
121976405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121976405
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121976405
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Ortholog
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
bHLH_INO4
RBR
Motif
Other DBs
NCBI-GeneID:
121976405
NCBI-ProteinID:
XP_042384486
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Position
4B:123772628..123775095
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AA seq
639 aa
AA seq
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MNLWADDNAFMMEAFMSPSDLHSSFPWAPTPGPPNSTTPSSSTAFLFNQDTLQKRLQTLI
EGAREGWTYGIFWQSSIDAVTGASFLRWGDGYYRGCDEDKRKQSTASVAEREYRKRVLRE
LNSLTSGGGADEAVEEEVTDTEWFFLVSMTQSFIDGADLPGQAFYSRVPSWVAGAGRLTS
SPWERARQAQMLGIQTMVCVSVGSGVLELGSTDLIPQRPEIIGKIHALFNFNSPDAASAE
TATPASYLPPESAEVNPAADQGEADPLHWLTDPSIAEVKDSVSPLSATPAISLTKSPIQF
DSNPSSSIQVQKIQTQTPPSSSKEYTYSEFVSNGAVRPHSVKPESGDILDFAGGKRNPSP
APTTGSLFSHHQANVLADDKKNNRPTGETSRASNNDEGLVSFSSAPARPSSNGQLKSTSA
ATAAPDSDQSDLEASVREVESSLVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLN
QRFYALRAVVPNVSKMDKASLLGDAVSYINELRSKLQALEIDKEEHQGQIEALKKAGKDE
LKMMNAGGGGRCHAVEIEVKILGMEAMIRLQCHKRNHPAAKLMATLKDLDLEVYYASVSV
VKDLMIQQVTVKMSSQVYTQEQLNSALYSRLAAEALITR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttgggccgacgacaacgccttcatgatggaggctttcatgtccccctccgac
ctccactcctccttcccatgggcgcccaccccaggtcctcctaactcaactactccctct
tcctccaccgccttcttattcaaccaggacaccctccagaagcggctgcagacgctgatc
gagggcgcacgggaaggctggacctacggcatcttctggcagtcgtcgatcgacgcagtc
accggcgcttccttcctacgctggggcgatggctactaccgcggatgcgacgaggacaag
cggaagcagtcgaccgccagcgtcgccgagcgggagtaccgcaagcgcgtcctgcgggag
ctcaactcgctgacctccggcggaggggccgacgaggccgtcgaggaggaggtcacagac
accgagtggttttttctggtttccatgacccagtccttcatcgacggcgccgatctcccc
ggccaagccttctactcaagggttccttcttgggtagccggcgccggccggctgacatcg
tctccgtgggaacgcgcccgtcaggctcagatgctcggcatccagaccatggtctgtgtc
tccgtcgggtccggagtgctcgagctaggttccaccgacttgattccgcagagaccagag
atcataggcaagatccacgctctcttcaatttcaactcccccgacgcggcctccgccgag
accgccacgcctgcatcttacctcccgccggaatccgcagaggtgaatcccgcagccgac
cagggcgaggcagatccgttacactggctcacagatccgtccatcgccgaggtcaaggac
tcggtttcccctctttctgcaactcccgccatctccctcacaaaatccccaattcagttc
gatagcaaccctagctcttcgatccaggtccagaaaatccagacacagaccccgccgtct
tcgtccaaagagtacacgtactccgaattcgtctctaatggagcagtccgccctcactcc
gtcaagccggagtccggcgacatccttgatttcgccggtggcaagaggaacccttcgcca
gcccctaccaccggcagcctcttctcccaccatcaggccaacgtcttggcggacgacaag
aagaacaacagacccactggagagacatcccgggcgagcaacaacgatgagggcttggtt
tctttctcctcagctcccgcgagaccatcgtccaatggccaattgaagtcgacttccgcg
gccacagctgcccctgactcggatcagtccgatctcgaggcgtcggtgcgcgaagtggag
agcagcctggtggtggaaccagagaagcggccgaggaaacgcggccgtaagcccgccaat
ggacgggaggagcctctgaaccatgtagaagcagaacggcagcgccgcgagaagcttaac
caacgattctacgctctccgtgcagtcgtccccaatgtgtccaagatggacaaggcctcc
ctcctcggggacgcagtctcctacatcaatgaactccggtcaaagctccaagctttggaa
attgacaaggaggaacatcaaggacagatcgaagccctcaaaaaagcagggaaagatgag
cttaagatgatgaatgccggtggcggcggccggtgtcacgctgtcgagatcgaagtgaag
atactcggaatggaagccatgatcagattacagtgtcataaaaggaaccatccagctgca
aagcttatggctacactaaaagaccttgatctcgaagtatattatgcaagtgtctcggtc
gtgaaggacctcatgatccaacaagtaacagtgaagatgtcgagccaggtttacacacag
gagcagctcaactctgctctctactccagattagctgccgaggcattgattactcgataa
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