Zingiber officinale (ginger): 121976460
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Entry
121976460 CDS
T08725
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03250
Viral life cycle - HIV-1
zof03272
Virion - Hepatitis viruses
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121976460
03272 Virion - Hepatitis viruses
121976460
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121976460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121976460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121976460
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
121976460
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121976460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
121976460
NCBI-ProteinID:
XP_042384561
LinkDB
All DBs
Position
4B:complement(124897253..124905574)
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AA seq
818 aa
AA seq
DB search
MTTGNSTLAVPDKKTTVVDLYRPLRHYIAVTYGEREAQEAEDDLNAVRRLRLDLEKPIEA
VASDLRRDLLLNYYRALASIEPRFPISPDPAHVHSLTFTWFDAFKPSKKVAQTSIHLEKA
AVIFNLGAVYSQIALSANRTDAAGLKQACNAFQSAAGAFAYLRDNAAARISSTGGVTVDV
SVECAWMLEKLMLAQAQECFFEKVIGDAKPPTLCSKVARQVGLYYEEAHAALNLPPLNQH
FDRSWIAHVQSKAAQFYAEASYRCSLDLHDKEEIAEEICRWRTAINALADAKKYSRGAAP
PLLDAVNKLETKMTSNLERAIKENEQVYLMRVPDASSLAALPAASLVKSMPLAEVLDASK
EGLFSRLVPDNNTKALSKYTDIVDDIIRTQAEKLQQASEIARVRLKEMDLPDSILALEGS
FDLPLDLKEDVEALQIRGGPAGLEAELQQLKDLRRVNQELCIEIEELLNKEADEDAHFRS
QFGTKWNIPQSSILTKGLQDRLNKFAANIKQAINSDSRIERAVRDNSSLMAILDNKPIES
AIPNLARPIMSLDGNEDAIVGALKQSLRQIENLGVQRAGLEDMLKEMKRKDDILPKMMAN
TGSQEDLFKKEISKYDQICEEIVQNIEEQDQLLLQIQAQNDEFSVVFNLEDYKAAREKSF
KQISTAIAKYHEIKENINEGLNFYVTLQDAVTIIKQQCSDFVMTRNIQCREMVENLQRQS
NTYPQSAPQSAPPHAEQPRPGYSHLYTSYATPPQTNPYLIPSGQYQPSLQQPNRPTAYPG
WRGSYYPPQLQESPAPPPPYTTPSPYPPPNQGSYYRPQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggggaactcgacgctggctgtgccggacaagaagacaaccgtcgttgacctc
taccgcccgctccgccactacatcgccgtcacctacggcgagcgagaggcccaggaggca
gaggacgacctcaacgccgtccggcggctccgcctcgacctcgaaaagcccatcgaagcc
gtcgcctccgatctccgtcgcgatctcctcctcaactactaccgcgccctcgcctccatc
gagccccgcttccccatatcccccgaccccgctcacgtccactccctcaccttcacctgg
ttcgacgccttcaagccctcaaagaaggttgcgcagacgtccatacacctcgagaaggcg
gcggtcattttcaatctaggcgctgtctacagccagatcgccctatcggcgaaccgcaca
gacgctgcgggcctcaaacaggcctgcaacgcttttcagagcgcggcaggggcgtttgcc
tatcttcgcgataacgcggctgctaggatttcttccaccggtggggtaaccgttgatgtc
tcggtggaatgcgcctggatgctggagaagctaatgctggcgcaggcacaggaatgcttc
tttgagaaggttattggggatgccaagcccccaacactctgctcgaaagtcgcgcgccag
gttggcctctactacgaggaagctcatgctgcgctcaatttgccaccactcaaccagcac
tttgatcggtcttggattgctcatgtgcaatctaaggcagcacaattttatgcagaagct
agctatagatgctctttggatcttcatgataaggaagaaattgcggaagagatttgtcgg
tggaggactgcgataaatgcccttgctgatgccaagaaatattcaaggggtgctgcccca
cctttgctagatgctgttaacaaactggagaccaaaatgaccagtaacctggagagagct
attaaggagaacgaacaggtttatctcatgcgggttccagatgcaagttctttggctgct
ttgcctgcagcctctcttgtcaagtcaatgccattggcagaagttttagatgctagcaag
gagggactattctcaaggcttgttccagacaacaacaccaaggctctctctaagtacact
gacattgttgatgacattattcggacgcaagcagagaagttacagcaagccagtgagata
gcaagagttagactcaaagaaatggacctacctgattctatcttagcattggaaggtagc
tttgatttgcccttggatctcaaggaggatgttgaagctcttcagatcagaggtggtccc
gctgggttggaagctgagttacaacaactcaaagatttgaggagagttaatcaggaactc
tgtattgagattgaagagttactcaacaaggaagctgatgaggatgcacattttcgatcc
caatttggtacaaagtggaatatacctcaatcaagtatcctaacaaagggtttgcaggac
agactgaacaaatttgctgcaaacattaagcaagctatcaatagtgattcaaggatagag
agggctgtcagagacaattccagcctgatggcaatcctcgacaacaagccgattgaatcc
gcaattccaaatcttgcaaggccgataatgtctcttgatggcaatgaagatgctatagta
ggagcactgaaacaaagcttgaggcaaatagagaatctaggtgttcagagggctggtctg
gaagatatgttaaaagagatgaagagaaaggatgatatactaccaaagatgatggcaaac
actggatcacaagaagacctctttaagaaggagatatctaagtacgatcaaatttgtgaa
gaaattgttcaaaatattgaggaacaggaccaactgttgcttcaaatacaggcacaaaat
gatgagttctctgtcgtgtttaatcttgaagactacaaagctgctcgcgagaagagcttc
aaacagatctctactgcaatagcaaaatatcacgaaatcaaggagaatatcaatgagggg
ttgaacttttatgttacacttcaggatgcagtaacaattataaaacagcaatgcagcgat
ttcgtgatgaccagaaacattcagtgccgagaaatggttgagaatctccagaggcagtcc
aatacttatccacaatctgctcctcagagtgctccaccgcatgctgagcaacctcgacct
ggctattctcatctctatacatcttatgcaacacccccgcagaccaacccctacctcatt
cccagtggccagtatcagccttctctacagcaacccaaccggccaactgcataccctggg
tggcgcggatcttactatccgcctcagctgcaggagagtccagctcctccgccaccatat
acaacgccatctccttatccaccaccgaatcaaggaagctactacagacctcagtga
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