Zingiber officinale (ginger): 121976513
Help
Entry
121976513 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121976513
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121976513
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121976513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
vWA-TerF-like
Prok-RING_4
zf-RING_2
Sina_RING
zf-RING_5
TerY_C
RING_XB3-XBAT31
zf-RING_UBOX
DUF6643
Motif
Other DBs
NCBI-GeneID:
121976513
NCBI-ProteinID:
XP_042384634
LinkDB
All DBs
Position
4B:126005045..126008159
Genome browser
AA seq
424 aa
AA seq
DB search
MGAKCAKGFSQETDSRSYAQSRQVTQYRNSNSNHHSAPAAVRSNDPRPRIERRYSRISDN
YETLEQVTEALAESGLESSNLIVGIDFTKSNEWTGKFSFGGRSLHHIGDTTPNPYEQAIS
IIGRTLSAFDEDNLIPCFGFGDASTHDQDVFSFYPNEQPCNGFENTLARYKELLPHLRLA
GPTSFAPIIEMAMTIVEQTGGQYHVLLIIADGQVTRSVDTQFGHFGSQEQKTIDAIVRAS
EFPLSIILVGVGDGPWDMMKEFDDNIPARSYDNFQFVNFTEIMAKNIPLARKEAAFSLAA
LMEIPSQYKATIDMGILGCRTGKSPRRVPLLPPTGSQSKSSFGYDSSKSSNFHQSSSPYS
GYRAETSARTAPTSAFEIEICPICLSNPKDMVFGCGHQTCSACGQSLQSCPLCRTEIQTR
IKLY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgaaatgcgccaagggattctcgcaggagacggattctcgtagctacgcccag
tcccggcaagtgactcagtatcgaaattcgaacagcaaccaccactccgctcctgctgcc
gttcgatcgaatgatccgcggccgaggattgaacggaggtattcgcgaataagcgacaac
tacgagactttggagcaggttaccgaagccctagcagagtctggccttgagtcctctaat
ttaattgtaggcattgatttcacaaagagcaatgagtggacaggcaaattctcatttggt
ggccgtagcttgcatcacattggagatacaacaccgaatccttatgaacaagcaatctcc
attattggacgaaccttatcagcatttgacgaagacaacttgattccttgctttgggttt
ggagatgcatccacgcacgatcaagatgtttttagtttttatccaaatgagcaaccttgt
aatggttttgaaaatactctggcacgatacaaagaactactgcctcatctgagattggct
ggcccgacctcttttgcaccaattattgaaatggctatgactattgtggaacagactggt
ggtcagtaccatgttttattgataattgctgatggacaggttacaaggagtgtagatacc
caatttggtcactttggttctcaagagcagaaaactatagatgctattgtccgagcaagt
gaatttccattgtcaataatcttagttggagttggagacggtccttgggacatgatgaaa
gaatttgacgataacatacctgcccgttcctatgacaatttccagtttgtcaattttact
gagataatggcaaagaatatacctctagcaagaaaagaggcagcattttctctcgcagca
ttaatggagataccttctcaatataaagcaactatagacatggggatattgggttgtcga
acagggaagtctcctcgaagggtacctcttcttccccccactggaagtcaaagcaaatct
tcttttggatatgatagctccaagtcatcgaatttccatcaaagttcatcaccctattct
ggttatagagcagaaaccagtgcacgaactgcaccaacatcggccttcgaaattgagatt
tgtccaatttgtttgtctaatccaaaagacatggtcttcggctgtgggcaccagacatgt
tccgcctgtggccaaagtcttcagtcatgccctctttgccgtactgaaatccagactaga
ataaagctctactga
DBGET
integrated database retrieval system
